Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   DXX91_RS19935 Genome accession   NZ_CP031424
Coordinates   336229..336393 (+) Length   54 a.a.
NCBI ID   WP_269465305.1    Uniprot ID   -
Organism   Bacillus velezensis strain B-4     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 331229..341393
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXX91_RS19930 srfAB 333120..336212 (+) 3093 Protein_306 surfactin non-ribosomal peptide synthetase SrfAB -
  DXX91_RS19935 comS 336229..336393 (+) 165 WP_269465305.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6264.26 Da        Isoelectric Point: 11.7559

>NTDB_id=306719 DXX91_RS19935 WP_269465305.1 336229..336393(+) (comS) [Bacillus velezensis strain B-4]
MRPRRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=306719 DXX91_RS19935 WP_269465305.1 336229..336393(+) (comS) [Bacillus velezensis strain B-4]
ATGAGACCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment