Detailed information NTG0306711

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: DXX91_RS16960
• Genome accession: NZ_CP031424
• Coordinates: 3387647..3388810 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain B-4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3382647..3393810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DXX91_RS16930	-	3382912..3383331 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
DXX91_RS16935	comFC	3383405..3384094 (-)	690	WP_205649078.1	phosphoribosyltransferase family protein	Machinery gene
DXX91_RS16940	-	3384100..3384384 (-)	285	WP_003151389.1	competence protein ComFB	-
DXX91_RS16945	comFA	3384442..3385827 (-)	1386	WP_115996753.1	DEAD/DEAH box helicase	Machinery gene
DXX91_RS16950	-	3385935..3386783 (-)	849	WP_044052857.1	DegV family protein	-
DXX91_RS16955	degU	3386881..3387570 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
DXX91_RS16960	degS	3387647..3388810 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
DXX91_RS16965	-	3389033..3389680 (+)	648	WP_060657503.1	YigZ family protein	-
DXX91_RS16970	-	3389685..3390899 (+)	1215	WP_003151383.1	LCP family protein	-
DXX91_RS16975	-	3390989..3392065 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
DXX91_RS16980	-	3392198..3393394 (-)	1197	WP_115996755.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=306711 DXX91_RS16960 WP_003151385.1 3387647..3388810(-) (degS) [Bacillus velezensis strain B-4]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=306711 DXX91_RS16960 WP_003151385.1 3387647..3388810(-) (degS) [Bacillus velezensis strain B-4]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948