Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   KAN02_RS02190 Genome accession   NZ_CP036171
Coordinates   463665..465710 (-) Length   681 a.a.
NCBI ID   WP_087606050.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN02     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 458665..470710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN02_RS02155 (KAN02_02155) - 459141..459824 (+) 684 WP_002049738.1 outer membrane lipid asymmetry maintenance protein MlaD -
  KAN02_RS02160 (KAN02_02160) - 459851..460492 (+) 642 WP_002049753.1 phospholipid-binding protein MlaC -
  KAN02_RS02165 (KAN02_02165) - 460504..460791 (+) 288 WP_000250997.1 lipid asymmetry maintenance protein MlaB -
  KAN02_RS02170 (KAN02_02170) - 460866..461879 (-) 1014 WP_002049699.1 CorA family divalent cation transporter -
  KAN02_RS02175 (KAN02_02175) - 462037..462618 (+) 582 WP_002049746.1 TIGR00730 family Rossman fold protein -
  KAN02_RS02180 (KAN02_02180) - 462633..463034 (+) 402 WP_006582595.1 NUDIX hydrolase -
  KAN02_RS02185 (KAN02_02185) comF 463037..463672 (-) 636 WP_025469374.1 ComF family protein Machinery gene
  KAN02_RS02190 (KAN02_02190) recG 463665..465710 (-) 2046 WP_087606050.1 ATP-dependent DNA helicase RecG Machinery gene
  KAN02_RS02195 (KAN02_02195) - 465731..466546 (+) 816 WP_006580703.1 NAD(P)H-binding protein -
  KAN02_RS02200 (KAN02_02200) adeT2 466626..467612 (+) 987 WP_087606054.1 putative multidrug efflux protein AdeT2 -
  KAN02_RS02205 (KAN02_02205) plsB 467655..470228 (-) 2574 WP_004884590.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76475.11 Da        Isoelectric Point: 8.1791

>NTDB_id=306650 KAN02_RS02190 WP_087606050.1 463665..465710(-) (recG) [Acinetobacter nosocomialis strain KAN02]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINKHTPLPKTQLTAIYPSTDGLTQPKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNGQKRVSKEILTDLKQHQPMLRLVQGDVGAGKTLVAAIAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARTQAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLNRIATNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQSVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=306650 KAN02_RS02190 WP_087606050.1 463665..465710(-) (recG) [Acinetobacter nosocomialis strain KAN02]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTACTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGACTTGAACTTTATCATCCAGAAATTCAGCTCATTAATAAGCATACGC
CTCTACCCAAAACGCAGCTCACGGCAATTTACCCAAGTACTGATGGTTTAACGCAACCTAAGTTACGTGAATATGTTAAA
CAGGCGTTGAAGCATCATAGTGATGCTCTACCCGAGCTGCTTCCTAAACAATATACAAATGGATACGCACTCAAAGAAGC
CCTACATTACATTCATGAGCCACCTGTCGATGCCAATATGATTCAATTGGCCCAAGGGTCTCATCCTGCTCAGCAACGCC
TTATTTTTGAAGAGTTGGTCGCACATCAAATTAGCCTTCTCACGCGACGTGCTTATATTCGTCAAATTGCCTCACCTGCT
TTCCCAAGCAGCAAAGTACTTGCGAAAAAACTCTTAGAAGCTCTTCCCTTTCAAATGACCAACGGACAAAAGCGTGTATC
AAAAGAAATTTTAACGGACTTAAAACAACACCAACCGATGTTACGCTTGGTACAAGGTGATGTAGGTGCAGGTAAAACTT
TAGTCGCGGCAATTGCTGCATGTCATGCTTTAGAAGCAGATTGGCAAGTTGCCTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAGCGCTGGTTTGAACCTTTAGGTATTACAGTAGCTTGGCTGTCAGGCAAACAAAAAGG
TAAAGCACGAACACAAGCTGAACAACAAATCAAAGAAGGCCATGCCGAGCTTATTGTAGGTACGCATGCTTTGTTTCAAG
ATAATGTTGAGTTTGCCAAACTAGGACTCGTGATTATTGATGAGCAGCACCGCTTTGGGGTGGATCAACGATTAGCCTTA
CGCAACAAAGGCGCAGAACAACTCACACCACATCAACTCGTCATGACTGCTACGCCAATTCCTAGAACATTAGCAATGAG
TGCTTATGGCGATTTGGATACATCGATTATTGATGAATTGCCGCCAGGCCGAACTCCAATTCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTGCTAAATCGAATTGCTACAAATTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAATCCGAAACTTTAGATGCTCAAGCTGCCGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCTGATGAAAAGCAATCTGTCATGCAAGCATTTAAAAACAATGAACTACAAC
TGCTAATTGCAACAACTGTTATTGAGGTTGGGGTAGATGTACCTAATGCCTCAATTATGGTCATTGAAAATGCTGAACGC
TTAGGTCTTTCACAACTACACCAATTACGAGGTCGAGTCGGACGAGGTGCAAAGGCTAGTTTTTGTGTTCTTCTCTATAA
ACCCCCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAACGACGGCTTTGTCATTGCTGAAAAAG
ACCTTGAATTACGAGGTCCGGGTGAATTATTAGGAACAAAACAGACAGGTGATATGGGCTTCCGTGTCGCACGTTTAGAA
CGAGATGATCATTTACTGAGTCAAGCACATTACGTCGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGACGCCCT
CTTGAAACGCTGGCTACCTGAAGCACCTCGATATGCTTATGTTTAA

Domains

Predicted by InterProScan.

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(263-422)

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.626

98.238

0.488
  recG/mmsA Streptococcus pneumoniae R6

41.353

97.651

0.404
  recG/mmsA Streptococcus pneumoniae R36A

41.353

97.651

0.404
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389