Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | DK878_RS00420 | Genome accession | NZ_CP031379 |
| Coordinates | 72276..72542 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain ISU2660 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 67276..77542
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK878_RS00390 (DK878_00395) | recA | 68464..69615 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| DK878_RS00395 (DK878_00400) | spx | 69852..70250 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| DK878_RS00400 (DK878_00405) | - | 70350..70616 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| DK878_RS00405 (DK878_00410) | ruvX | 70616..71035 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| DK878_RS00410 (DK878_00415) | - | 71047..71367 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| DK878_RS00415 (DK878_00420) | - | 71625..72203 (+) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| DK878_RS00420 (DK878_00425) | comX/sigX | 72276..72542 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| DK878_RS00425 (DK878_00435) | rpsJ | 72864..73172 (+) | 309 | WP_013730061.1 | 30S ribosomal protein S10 | - |
| DK878_RS00430 (DK878_00440) | rplC | 73385..74011 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| DK878_RS00435 (DK878_00445) | rplD | 74036..74659 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| DK878_RS00440 (DK878_00450) | - | 74659..74958 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| DK878_RS00445 (DK878_00455) | rplB | 74976..75809 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| DK878_RS00450 (DK878_00460) | rpsS | 75911..76192 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| DK878_RS00455 (DK878_00465) | rplV | 76210..76554 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| DK878_RS00460 (DK878_00470) | rpsC | 76567..77220 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=306373 DK878_RS00420 WP_002939335.1 72276..72542(+) (comX/sigX) [Streptococcus suis strain ISU2660]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=306373 DK878_RS00420 WP_002939335.1 72276..72542(+) (comX/sigX) [Streptococcus suis strain ISU2660]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |