Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   DV160_RS10105 Genome accession   NZ_CP031336
Coordinates   1693030..1693641 (-) Length   203 a.a.
NCBI ID   WP_002247807.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M21717     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1688030..1698641
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV160_RS10060 dut 1688268..1688720 (-) 453 WP_002220679.1 dUTP diphosphatase -
  DV160_RS10065 - 1688863..1689291 (+) 429 Protein_1633 AzlC family ABC transporter permease -
  DV160_RS10090 pilX 1691039..1691512 (-) 474 WP_002247808.1 PilX family type IV pilin Machinery gene
  DV160_RS10095 pilK 1691517..1692116 (-) 600 WP_002220676.1 pilus assembly PilX family protein Machinery gene
  DV160_RS10100 pilJ 1692095..1693033 (-) 939 WP_002220674.1 PilW family protein Machinery gene
  DV160_RS10105 pilV 1693030..1693641 (-) 612 WP_002247807.1 type IV pilus modification protein PilV Machinery gene
  DV160_RS10110 pilH 1693665..1694330 (-) 666 WP_115425123.1 GspH/FimT family pseudopilin Machinery gene
  DV160_RS10115 dnaB 1694639..1696045 (-) 1407 WP_002220671.1 replicative DNA helicase -
  DV160_RS10125 - 1696208..1696795 (+) 588 WP_002220670.1 superoxide dismutase -
  DV160_RS10130 - 1697293..1697802 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  DV160_RS10135 - 1698133..1698465 (-) 333 WP_002213854.1 hypothetical protein -
  DV160_RS14225 - 1698510..1698617 (-) 108 Protein_1643 IS5/IS1182 family transposase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 21943.82 Da        Isoelectric Point: 4.5691

>NTDB_id=306083 DV160_RS10105 WP_002247807.1 1693030..1693641(-) (pilV) [Neisseria meningitidis strain M21717]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHTLSAVDGDFAIDAIKTKAQLAEEQLKRFSYELKNALPDAAAIHYAVCKDSLGAAPTLSAGSTFSQNCDGSAN
GDTLIKVLWVNDSAGDSDIARTNLETNGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=306083 DV160_RS10105 WP_002247807.1 1693030..1693641(-) (pilV) [Neisseria meningitidis strain M21717]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTATATGGGAAACCATACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATAAAAACTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACGCCG
TCTGCAAGGATTCGTTGGGTGCTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTCAAAATTGCGATGGTAGTGCAAAT
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGACGAA
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

90.338

100

0.921
  pilI Neisseria gonorrhoeae MS11

80.788

100

0.808
  pilV Neisseria gonorrhoeae MS11

80.788

100

0.808

Multiple sequence alignment