Detailed information
Bioinformatically predicted
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | DV160_RS10100 | Genome accession | NZ_CP031336 |
| Coordinates | 1692095..1693033 (-) | Length | 312 a.a. |
| NCBI ID | WP_002220674.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain M21717 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1647947..1706424 | 1692095..1693033 | within | 0 |
Gene organization within MGE regions
Location: 1647947..1706424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV160_RS09780 | - | 1648241..1649080 (-) | 840 | WP_002214477.1 | hypothetical protein | - |
| DV160_RS09785 | - | 1649121..1650128 (+) | 1008 | WP_002220741.1 | IS5 family transposase | - |
| DV160_RS13995 | - | 1650544..1650675 (+) | 132 | WP_002217434.1 | hypothetical protein | - |
| DV160_RS09800 | - | 1650672..1651040 (+) | 369 | WP_002220735.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| DV160_RS13555 | - | 1651056..1651226 (+) | 171 | WP_164728559.1 | hypothetical protein | - |
| DV160_RS09805 | - | 1651331..1651969 (+) | 639 | WP_002244527.1 | DUF4760 domain-containing protein | - |
| DV160_RS09810 | - | 1652328..1652564 (+) | 237 | WP_002217439.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| DV160_RS09815 | - | 1652566..1652913 (+) | 348 | WP_002217440.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DV160_RS09820 | - | 1652966..1653475 (-) | 510 | WP_002220734.1 | hypothetical protein | - |
| DV160_RS09825 | - | 1653487..1653960 (-) | 474 | WP_002220733.1 | D-Ala-D-Ala carboxypeptidase family metallohydrolase | - |
| DV160_RS09830 | - | 1654099..1654374 (-) | 276 | WP_002217443.1 | hypothetical protein | - |
| DV160_RS09835 | - | 1654371..1654796 (-) | 426 | WP_002220721.1 | hypothetical protein | - |
| DV160_RS09840 | - | 1654860..1655231 (-) | 372 | WP_002220720.1 | hypothetical protein | - |
| DV160_RS14060 | - | 1655299..1655505 (-) | 207 | WP_002217448.1 | hypothetical protein | - |
| DV160_RS09850 | - | 1655522..1655968 (-) | 447 | WP_002220718.1 | hypothetical protein | - |
| DV160_RS09855 | gpJ | 1656039..1660304 (-) | 4266 | WP_002220717.1 | TipJ family phage tail tip protein | - |
| DV160_RS09860 | - | 1660440..1661162 (-) | 723 | WP_002220716.1 | tail assembly protein | - |
| DV160_RS09865 | - | 1661159..1661914 (-) | 756 | WP_115425121.1 | C40 family peptidase | - |
| DV160_RS09870 | - | 1661911..1662633 (-) | 723 | WP_002217456.1 | phage minor tail protein L | - |
| DV160_RS09875 | - | 1662693..1662962 (-) | 270 | WP_002217457.1 | phage tail protein | - |
| DV160_RS09880 | - | 1662984..1666202 (-) | 3219 | WP_115425122.1 | phage tail length tape measure family protein | - |
| DV160_RS09885 | - | 1666195..1666467 (-) | 273 | WP_002220710.1 | DUF1799 domain-containing protein | - |
| DV160_RS09890 | - | 1666515..1666826 (-) | 312 | WP_002220709.1 | phage tail assembly chaperone | - |
| DV160_RS09895 | - | 1666890..1667531 (-) | 642 | WP_002220708.1 | phage tail protein | - |
| DV160_RS09900 | - | 1667563..1667982 (-) | 420 | WP_002244524.1 | hypothetical protein | - |
| DV160_RS09905 | - | 1667963..1668265 (-) | 303 | WP_002244523.1 | head-tail joining protein | - |
| DV160_RS09910 | - | 1668258..1668485 (-) | 228 | WP_002220705.1 | hypothetical protein | - |
| DV160_RS09915 | - | 1668543..1670435 (-) | 1893 | WP_002220704.1 | phage major capsid protein | - |
| DV160_RS09920 | - | 1670416..1671978 (-) | 1563 | WP_002220703.1 | phage portal protein | - |
| DV160_RS09925 | - | 1671987..1672241 (-) | 255 | WP_002220702.1 | hypothetical protein | - |
| DV160_RS09930 | - | 1672228..1672614 (-) | 387 | WP_002220701.1 | DUF3310 domain-containing protein | - |
| DV160_RS09935 | - | 1672617..1672772 (-) | 156 | WP_228476387.1 | hypothetical protein | - |
| DV160_RS09940 | - | 1672843..1675689 (-) | 2847 | WP_002220699.1 | primase-helicase family protein | - |
| DV160_RS09945 | - | 1675804..1676151 (-) | 348 | WP_002220698.1 | hypothetical protein | - |
| DV160_RS09955 | - | 1676551..1677267 (+) | 717 | WP_002220696.1 | LexA family transcriptional regulator | - |
| DV160_RS09960 | - | 1677370..1677795 (+) | 426 | WP_002220695.1 | hypothetical protein | - |
| DV160_RS09965 | - | 1678026..1678226 (+) | 201 | WP_002219431.1 | hypothetical protein | - |
| DV160_RS09970 | - | 1678294..1678653 (+) | 360 | WP_002220694.1 | hypothetical protein | - |
| DV160_RS09975 | - | 1678678..1679532 (+) | 855 | WP_002220693.1 | YfdQ family protein | - |
| DV160_RS09980 | - | 1679604..1679819 (+) | 216 | WP_002220692.1 | hypothetical protein | - |
| DV160_RS09985 | - | 1679855..1680115 (+) | 261 | WP_002220690.1 | NGO1622 family putative holin | - |
| DV160_RS09990 | - | 1680112..1680405 (+) | 294 | WP_002220689.1 | hypothetical protein | - |
| DV160_RS09995 | - | 1680408..1680599 (+) | 192 | WP_002219435.1 | type ISP restriction/modification enzyme | - |
| DV160_RS10000 | - | 1680599..1680739 (+) | 141 | WP_002220688.1 | hypothetical protein | - |
| DV160_RS10005 | - | 1680736..1680945 (+) | 210 | WP_002220687.1 | hypothetical protein | - |
| DV160_RS10010 | - | 1681003..1681920 (-) | 918 | WP_002220686.1 | KilA-N domain-containing protein | - |
| DV160_RS10015 | - | 1682786..1683298 (-) | 513 | WP_002220685.1 | DUF4760 domain-containing protein | - |
| DV160_RS10025 | - | 1683701..1684081 (-) | 381 | WP_002220683.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| DV160_RS10030 | - | 1684236..1685432 (-) | 1197 | WP_002224447.1 | tyrosine-type recombinase/integrase | - |
| DV160_RS10045 | yaaA | 1685964..1686743 (-) | 780 | WP_002220681.1 | peroxide stress protein YaaA | - |
| DV160_RS14220 | - | 1686792..1686917 (-) | 126 | Protein_1630 | IS5/IS1182 family transposase | - |
| DV160_RS10055 | dapC | 1687005..1688192 (-) | 1188 | WP_002220680.1 | succinyldiaminopimelate transaminase | - |
| DV160_RS10060 | dut | 1688268..1688720 (-) | 453 | WP_002220679.1 | dUTP diphosphatase | - |
| DV160_RS10065 | - | 1688863..1689291 (+) | 429 | Protein_1633 | AzlC family ABC transporter permease | - |
| DV160_RS10090 | pilX | 1691039..1691512 (-) | 474 | WP_002247808.1 | PilX family type IV pilin | Machinery gene |
| DV160_RS10095 | pilK | 1691517..1692116 (-) | 600 | WP_002220676.1 | pilus assembly PilX family protein | Machinery gene |
| DV160_RS10100 | pilJ | 1692095..1693033 (-) | 939 | WP_002220674.1 | PilW family protein | Machinery gene |
| DV160_RS10105 | pilV | 1693030..1693641 (-) | 612 | WP_002247807.1 | type IV pilus modification protein PilV | Machinery gene |
| DV160_RS10110 | pilH | 1693665..1694330 (-) | 666 | WP_115425123.1 | GspH/FimT family pseudopilin | Machinery gene |
| DV160_RS10115 | dnaB | 1694639..1696045 (-) | 1407 | WP_002220671.1 | replicative DNA helicase | - |
| DV160_RS10125 | - | 1696208..1696795 (+) | 588 | WP_002220670.1 | superoxide dismutase | - |
| DV160_RS10130 | - | 1697293..1697802 (-) | 510 | WP_002213852.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| DV160_RS10135 | - | 1698133..1698465 (-) | 333 | WP_002213854.1 | hypothetical protein | - |
| DV160_RS14225 | - | 1698510..1698617 (-) | 108 | Protein_1643 | IS5/IS1182 family transposase | - |
| DV160_RS10140 | cysT | 1698756..1699592 (+) | 837 | WP_002224587.1 | sulfate ABC transporter permease subunit CysT | - |
| DV160_RS10145 | cysW | 1699847..1700707 (+) | 861 | WP_002220668.1 | sulfate ABC transporter permease subunit CysW | - |
| DV160_RS10150 | - | 1700704..1701777 (+) | 1074 | WP_002220667.1 | sulfate/molybdate ABC transporter ATP-binding protein | - |
| DV160_RS10155 | ilvA | 1701834..1703360 (-) | 1527 | WP_002220666.1 | threonine ammonia-lyase, biosynthetic | - |
| DV160_RS10165 | - | 1703508..1704677 (+) | 1170 | WP_002220665.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| DV160_RS10170 | - | 1704802..1705374 (-) | 573 | WP_002220664.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| DV160_RS10175 | - | 1705441..1706424 (-) | 984 | WP_002213870.1 | ribose-phosphate pyrophosphokinase | - |
Sequence
Protein
Download Length: 312 a.a. Molecular weight: 34508.22 Da Isoelectric Point: 8.7082
>NTDB_id=306082 DV160_RS10100 WP_002220674.1 1692095..1693033(-) (pilJ) [Neisseria meningitidis strain M21717]
MRRKMLNVPKGNYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFTSRKLNDAANERLSEQQDLRNAATLIVRDARMAGSFG
CFNMSEHPAIDVISDTTQQNSPFSLKRNGIDKLIPIAESSNINYQNFFQFGSALIFQYGIDDVNASTATTVVSSCAVISK
PGKQIPTLEDAKKELKIPQDKEQNGNIARQRHVVNAYAVGRIAGEEGLFRFQLDDKGKWGNPQLLVKKVRRMKVRYIYVF
GCPEDDDAGKEETFKYTDKFDSSTNAVTPAGVEVLLSSGTDTKIAASSDNYIYAYRIDATIRGGNVCANRTL
MRRKMLNVPKGNYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFTSRKLNDAANERLSEQQDLRNAATLIVRDARMAGSFG
CFNMSEHPAIDVISDTTQQNSPFSLKRNGIDKLIPIAESSNINYQNFFQFGSALIFQYGIDDVNASTATTVVSSCAVISK
PGKQIPTLEDAKKELKIPQDKEQNGNIARQRHVVNAYAVGRIAGEEGLFRFQLDDKGKWGNPQLLVKKVRRMKVRYIYVF
GCPEDDDAGKEETFKYTDKFDSSTNAVTPAGVEVLLSSGTDTKIAASSDNYIYAYRIDATIRGGNVCANRTL
Nucleotide
Download Length: 939 bp
>NTDB_id=306082 DV160_RS10100 WP_002220674.1 1692095..1693033(-) (pilJ) [Neisseria meningitidis strain M21717]
ATGAGACGTAAAATGCTAAACGTACCAAAAGGCAATTATGATGGTATGAAGGGTTTTACCATTATTGAATTTTTGGTTGC
GGGCATGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTCACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTTCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATCCTGCAATTGATGTTATTTCCGATACGACGCAACAAAATTCTCCTTTTTCCTTAAAAAG
GAACGGTATAGATAAACTTATTCCCATAGCGGAATCTTCAAATATCAATTATCAGAATTTTTTCCAGTTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCACCGCGACTACCGTCGTCAGCAGCTGTGCCGTAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGCAGGATAAGGAGCAAAATGGCAATAT
AGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGTTCCGCTTCCAATTGG
ATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTGAAAAAGGTTAGACGTATGAAAGTGCGGTATATCTATGTTTTC
GGCTGTCCTGAAGATGACGATGCCGGCAAAGAGGAAACATTCAAATATACGGATAAATTCGACAGCTCCACAAATGCTGT
TACGCCCGCCGGGGTGGAGGTTTTATTGAGTAGCGGTACTGATACCAAGATTGCCGCTTCTTCAGACAATTATATTTATG
CTTACCGTATCGATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
ATGAGACGTAAAATGCTAAACGTACCAAAAGGCAATTATGATGGTATGAAGGGTTTTACCATTATTGAATTTTTGGTTGC
GGGCATGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTCACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTTCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCCGAGCATCCTGCAATTGATGTTATTTCCGATACGACGCAACAAAATTCTCCTTTTTCCTTAAAAAG
GAACGGTATAGATAAACTTATTCCCATAGCGGAATCTTCAAATATCAATTATCAGAATTTTTTCCAGTTTGGTAGCGCAT
TGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCACCGCGACTACCGTCGTCAGCAGCTGTGCCGTAATATCGAAA
CCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTCCGCAGGATAAGGAGCAAAATGGCAATAT
AGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGTTCCGCTTCCAATTGG
ATGATAAGGGCAAGTGGGGTAATCCTCAGTTGCTCGTGAAAAAGGTTAGACGTATGAAAGTGCGGTATATCTATGTTTTC
GGCTGTCCTGAAGATGACGATGCCGGCAAAGAGGAAACATTCAAATATACGGATAAATTCGACAGCTCCACAAATGCTGT
TACGCCCGCCGGGGTGGAGGTTTTATTGAGTAGCGGTACTGATACCAAGATTGCCGCTTCTTCAGACAATTATATTTATG
CTTACCGTATCGATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACACTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
83.544 |
100 |
0.846 |