Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   DV167_RS08595 Genome accession   NZ_CP031329
Coordinates   1462235..1462930 (-) Length   231 a.a.
NCBI ID   WP_002242215.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22425     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1457235..1467930
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV167_RS08585 - 1459506..1460312 (-) 807 WP_002242238.1 inner membrane protein YpjD -
  DV167_RS08590 ffh 1460532..1461902 (+) 1371 WP_002242169.1 signal recognition particle protein -
  DV167_RS08595 dsbA2 1462235..1462930 (-) 696 WP_002242215.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  DV167_RS08600 - 1463045..1465153 (-) 2109 WP_002251031.1 TonB-dependent receptor -
  DV167_RS08605 - 1465339..1465944 (-) 606 WP_002234517.1 nitroreductase family protein -
  DV167_RS08610 - 1465993..1466391 (-) 399 WP_002251030.1 DoxX family protein -
  DV167_RS08615 - 1466499..1467410 (+) 912 WP_002236663.1 LysR family transcriptional regulator -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25384.92 Da        Isoelectric Point: 5.3625

>NTDB_id=305795 DV167_RS08595 WP_002242215.1 1462235..1462930(-) (dsbA2) [Neisseria meningitidis strain M22425]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADIDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=305795 DV167_RS08595 WP_002242215.1 1462235..1462930(-) (dsbA2) [Neisseria meningitidis strain M22425]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCCACGCCTATCCCGCAACAGCAGGCCGGCAAAGTCGAAGTCTTGGAATTTTTCGGCTACTTCTGTCCGCATTGCGCA
CATTTGGAACCGGTTTTGAGCGAACACACCAAAACGTTTAAAGACGATACCTACCTGCGTCGCGAGCATGTGATTTGGGG
TGACGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCTGATATCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(64-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.537

100

0.965

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment