Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | DV115_RS07920 | Genome accession | NZ_CP031325 |
| Coordinates | 1418818..1419417 (-) | Length | 199 a.a. |
| NCBI ID | WP_003750265.1 | Uniprot ID | - |
| Organism | Neisseria polysaccharea strain M18661 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1413818..1424417
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV115_RS07900 | - | 1413969..1414481 (-) | 513 | WP_003752945.1 | shikimate kinase | - |
| DV115_RS07905 | pilQ | 1415385..1417574 (-) | 2190 | WP_115437596.1 | type IV pilus secretin PilQ | Machinery gene |
| DV115_RS07910 | pilP | 1417592..1418137 (-) | 546 | WP_003750267.1 | pilus assembly protein PilP | Machinery gene |
| DV115_RS07915 | - | 1418155..1418817 (-) | 663 | WP_003750266.1 | type 4a pilus biogenesis protein PilO | - |
| DV115_RS07920 | pilN | 1418818..1419417 (-) | 600 | WP_003750265.1 | PilN domain-containing protein | Machinery gene |
| DV115_RS07925 | pilM | 1419420..1420535 (-) | 1116 | WP_115437597.1 | type IV pilus biogenesis protein PilM | - |
| DV115_RS07930 | - | 1420688..1423084 (+) | 2397 | WP_003750261.1 | penicillin-binding protein 1A | - |
| DV115_RS07935 | yihA | 1423206..1423832 (-) | 627 | WP_025456630.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22412.63 Da Isoelectric Point: 9.1696
>NTDB_id=305653 DV115_RS07920 WP_003750265.1 1418818..1419417(-) (pilN) [Neisseria polysaccharea strain M18661]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPESTYLTSLDAVTADSYRLNGRTSSDNRVATMMRAMPNTGIFKQPELL
SIKKNNSYQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPESTYLTSLDAVTADSYRLNGRTSSDNRVATMMRAMPNTGIFKQPELL
SIKKNNSYQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=305653 DV115_RS07920 WP_003750265.1 1418818..1419417(-) (pilN) [Neisseria polysaccharea strain M18661]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAATTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACACTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTTAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATTGAGGAACTTCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGAAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTACCGGTTAAACGGCA
GGACATCCAGCGACAACCGCGTTGCCACCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGTATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAATTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACACTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTTAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATTGAGGAACTTCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGAAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTACCGGTTAAACGGCA
GGACATCCAGCGACAACCGCGTTGCCACCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGTATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.99 |
100 |
0.98 |