Detailed information NTG0305645

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: DV115_RS06375
• Genome accession: NZ_CP031325
• Coordinates: 1153915..1154364 (+)
• Length: 149 a.a.
• NCBI ID: WP_003754601.1
• Uniprot ID: -
• Organism: Neisseria polysaccharea strain M18661
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1148915..1159364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV115_RS06370	-	1153362..1153827 (+)	466	Protein_1069	helix-hairpin-helix domain-containing protein	-
DV115_RS06375	comP	1153915..1154364 (+)	450	WP_003754601.1	type IV pilin protein	Machinery gene
DV115_RS06380	-	1155134..1155472 (+)	339	WP_003754607.1	hypothetical protein	-
DV115_RS06385	-	1155608..1156045 (+)	438	WP_003754608.1	hypothetical protein	-
DV115_RS12065	-	1156131..1156329 (-)	199	Protein_1073	succinyldiaminopimelate transaminase	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16833.78 Da
• Isoelectric Point: 9.7951

>NTDB_id=305645 DV115_RS06375 WP_003754601.1 1153915..1154364(+) (comP) [Neisseria polysaccharea strain M18661]
MTDNRGFTLVELISAVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCNDGLDYFKGNDKDCKLLK

Nucleotide

• Length: 450 bp

>NTDB_id=305645 DV115_RS06375 WP_003754601.1 1153915..1154364(+) (comP) [Neisseria polysaccharea strain M18661]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGCGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGGTTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGT
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTTATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAATGACG
GACTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria gonorrhoeae MS11	98.658	100	0.987
comP	Neisseria meningitidis 8013	97.987	100	0.98
comP	Neisseria subflava NJ9703	48.98	98.658	0.483