Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | AHALO_RS13375 | Genome accession | NZ_CP031218 |
| Coordinates | 2767687..2767923 (-) | Length | 78 a.a. |
| NCBI ID | WP_101185483.1 | Uniprot ID | A0A2N1J0N0 |
| Organism | Malaciobacter halophilus strain CCUG 53805 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2762687..2772923
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AHALO_RS13340 (AHALO_2666) | - | 2762714..2763658 (+) | 945 | WP_101185474.1 | polysaccharide deacetylase family protein | - |
| AHALO_RS13345 (AHALO_2667) | frr | 2763679..2764236 (+) | 558 | WP_101185475.1 | ribosome recycling factor | - |
| AHALO_RS13350 (AHALO_2668) | pyrE | 2764240..2764848 (+) | 609 | WP_101185476.1 | orotate phosphoribosyltransferase | - |
| AHALO_RS13355 (AHALO_2669) | - | 2764854..2765342 (+) | 489 | WP_101185477.1 | RDD family protein | - |
| AHALO_RS13360 (AHALO_2670) | - | 2765343..2766422 (+) | 1080 | WP_101185478.1 | MFS transporter | - |
| AHALO_RS13365 (AHALO_2671) | - | 2766427..2767164 (-) | 738 | WP_101185479.1 | YaaA family protein | - |
| AHALO_RS13370 (AHALO_2672) | - | 2767175..2767585 (-) | 411 | WP_101185481.1 | YchJ family protein | - |
| AHALO_RS13375 (AHALO_2673) | Cj0011c | 2767687..2767923 (-) | 237 | WP_101185483.1 | ComEA family DNA-binding protein | Machinery gene |
| AHALO_RS13380 (AHALO_2674) | - | 2768231..2768626 (+) | 396 | WP_101185485.1 | hypothetical protein | - |
| AHALO_RS13385 (AHALO_2675) | - | 2768615..2769028 (-) | 414 | WP_101185487.1 | DUF695 domain-containing protein | - |
| AHALO_RS13390 (AHALO_2676) | ung | 2769022..2769672 (-) | 651 | WP_101185489.1 | uracil-DNA glycosylase | - |
| AHALO_RS13395 (AHALO_2677) | - | 2769756..2770346 (+) | 591 | WP_101185491.1 | LemA family protein | - |
| AHALO_RS13400 (AHALO_2678) | - | 2770348..2771220 (+) | 873 | WP_101185493.1 | TPM domain-containing protein | - |
| AHALO_RS13405 (AHALO_2679) | - | 2771220..2771831 (+) | 612 | WP_101185495.1 | TPM domain-containing protein | - |
| AHALO_RS13410 (AHALO_2680) | - | 2771828..2772478 (+) | 651 | WP_101185497.1 | HAD family hydrolase | - |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 8750.55 Da Isoelectric Point: 10.6050
>NTDB_id=304139 AHALO_RS13375 WP_101185483.1 2767687..2767923(-) (Cj0011c) [Malaciobacter halophilus strain CCUG 53805]
MKKILLGLLCSFVLVFASMDFNSATKEELMSIKGIGEKKAQAIIDYRKSNKITKLDDLKKIKGFGDKLVSKIKNSQKL
MKKILLGLLCSFVLVFASMDFNSATKEELMSIKGIGEKKAQAIIDYRKSNKITKLDDLKKIKGFGDKLVSKIKNSQKL
Nucleotide
Download Length: 237 bp
>NTDB_id=304139 AHALO_RS13375 WP_101185483.1 2767687..2767923(-) (Cj0011c) [Malaciobacter halophilus strain CCUG 53805]
ATGAAAAAAATTCTTTTAGGTTTGTTGTGTTCTTTTGTTTTGGTATTTGCATCAATGGATTTTAATAGTGCTACAAAAGA
GGAGTTGATGTCTATTAAAGGAATTGGGGAGAAAAAAGCACAAGCAATTATTGATTACAGAAAATCAAATAAAATCACAA
AACTTGATGATTTAAAAAAGATTAAAGGGTTTGGAGATAAGCTTGTGTCAAAAATAAAAAATTCTCAAAAACTTTAA
ATGAAAAAAATTCTTTTAGGTTTGTTGTGTTCTTTTGTTTTGGTATTTGCATCAATGGATTTTAATAGTGCTACAAAAGA
GGAGTTGATGTCTATTAAAGGAATTGGGGAGAAAAAAGCACAAGCAATTATTGATTACAGAAAATCAAATAAAATCACAA
AACTTGATGATTTAAAAAAGATTAAAGGGTTTGGAGATAAGCTTGTGTCAAAAATAAAAAATTCTCAAAAACTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
51.351 |
94.872 |
0.487 |
| comE | Neisseria gonorrhoeae MS11 |
40.26 |
98.718 |
0.397 |
| comE | Neisseria gonorrhoeae MS11 |
40.26 |
98.718 |
0.397 |
| comE | Neisseria gonorrhoeae MS11 |
40.26 |
98.718 |
0.397 |
| comE | Neisseria gonorrhoeae MS11 |
40.26 |
98.718 |
0.397 |