Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   DR994_RS02115 Genome accession   NZ_CP030927
Coordinates   392226..393038 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain CS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 387226..398038
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DR994_RS02095 (DR994_02145) - 388269..388655 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  DR994_RS09800 - 388713..389520 (-) 808 Protein_369 GNAT family N-acetyltransferase -
  DR994_RS02100 (DR994_02155) yidA 389728..390537 (+) 810 WP_011226081.1 sugar-phosphatase -
  DR994_RS02105 (DR994_02160) - 390539..391753 (+) 1215 WP_173940373.1 aminoacyltransferase -
  DR994_RS02110 (DR994_02165) - 391805..392166 (-) 362 Protein_372 YbaN family protein -
  DR994_RS02115 (DR994_02170) vicX 392226..393038 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  DR994_RS02120 (DR994_02175) vicK 393044..394426 (-) 1383 WP_173940374.1 cell wall metabolism sensor histidine kinase VicK Regulator
  DR994_RS02125 (DR994_02180) vicR 394419..395126 (-) 708 WP_173940375.1 response regulator YycF Regulator
  DR994_RS02130 (DR994_02185) - 395653..396420 (+) 768 WP_173940376.1 amino acid ABC transporter ATP-binding protein -
  DR994_RS02135 (DR994_02190) - 396432..397265 (+) 834 WP_022096756.1 transporter substrate-binding domain-containing protein -
  DR994_RS02140 (DR994_02195) - 397283..397981 (+) 699 WP_022096755.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=302342 DR994_RS02115 WP_011681204.1 392226..393038(-) (vicX) [Streptococcus thermophilus strain CS9]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=302342 DR994_RS02115 WP_011681204.1 392226..393038(-) (vicX) [Streptococcus thermophilus strain CS9]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774

Multiple sequence alignment