Detailed information NTG0302036

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: DS737_RS14815
• Genome accession: NZ_CP030880
• Coordinates: 3200638..3202068 (+)
• Length: 476 a.a.
• NCBI ID: WP_113997842.1
• Uniprot ID: -
• Organism: Acinetobacter haemolyticus strain HW-2A
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3195638..3207068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DS737_RS14795	thrC	3195922..3197061 (+)	1140	WP_004637599.1	threonine synthase	-
DS737_RS14800	pbpG	3197121..3198185 (-)	1065	WP_004637598.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
DS737_RS14805	-	3198396..3199031 (+)	636	WP_005083960.1	response regulator	-
DS737_RS14810	pilS	3199050..3200615 (+)	1566	WP_113997841.1	PAS domain-containing sensor histidine kinase	Regulator
DS737_RS14815	pilR	3200638..3202068 (+)	1431	WP_113997842.1	sigma-54 dependent transcriptional regulator	Regulator
DS737_RS14820	-	3202109..3203275 (-)	1167	WP_113997843.1	S41 family peptidase	-
DS737_RS14825	gpmI	3203285..3204829 (-)	1545	WP_008942248.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
DS737_RS14830	lptG	3204954..3206024 (-)	1071	WP_113997844.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 53535.50 Da
• Isoelectric Point: 6.1502

>NTDB_id=302036 DS737_RS14815 WP_113997842.1 3200638..3202068(+) (pilR) [Acinetobacter haemolyticus strain HW-2A]
MATKQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKKFFTEFQYDACLTDLNLPDGNGLDLVQHVTQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLIQKALNRPRPEQEAAETALENKLLIGRSAPIQQLRIALKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLELLVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILL
LANHFIQRICQEWELPAKTLSSRAEQFLLQQYFPGNVRELRNIIERAITLSDDEAIDLAHLQTAPLRSPISMPSAPSYSQ
EEVEQPQYTSPSTSSKKLPPEGLERYLENIEKEVLLNALNLTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEEDDT

Nucleotide

• Length: 1431 bp

>NTDB_id=302036 DS737_RS14815 WP_113997842.1 3200638..3202068(+) (pilR) [Acinetobacter haemolyticus strain HW-2A]
ATGGCAACTAAACAACCACTCGTCTTGCTCGTAGACGACGAAGAGGACTTGTGTCTTCTCATGCAAATGACACTTGCGCG
TATGGGAATTAAGACACATTTGGCTTATCGTGTAGAGCAAGCAAAAAAATTCTTTACTGAATTTCAATATGATGCATGTT
TAACTGATTTAAATCTTCCAGACGGCAACGGTTTAGATCTCGTCCAACATGTCACCCAAAATTACCCAAATACTCCGATC
GCTGTGCTGACAGCCTATGGCAATATGGACATTGCGATTGCAGCATTAAAAGCTGGGGCATTTGACTTCGTTAGCAAACC
AGTCAACCAAGTGCATTTGGATCAATTGATTCAAAAAGCATTGAATCGACCACGACCTGAGCAAGAAGCGGCTGAAACAG
CCTTAGAAAATAAACTCCTGATTGGACGTTCTGCGCCGATTCAACAACTGCGCATTGCATTAAAGAAAATCGCGCGATCA
CAAGCGCCTGTCTTTATCACCGGGGAGTCGGGAACTGGAAAAGAAGTTGTTGCCAACTTGGTTCACCGCTTAAGTAATCG
TAGTGAAGGGCCTTTTATTGCCATAAACTGCGGTGCAATTCCAACAGAACTGATGGAAAGCGAGCTTTTCGGGCACAAAA
AAGGCAGTTTCACTGGGGCGACCCAAGATAAACAAGGTTTAATTTTATCAGCACATGGCGGTAGTTTATTTCTCGATGAA
ATCGCTGAACTGCCACTCAACATGCAAGTAAAATTATTGCGTGCAGTGCAAGAAAAGAAAATCCGCCCTGTAGGCTCAGA
CCAAGAAATTGATGTCGATTTCCGTGTGATTAGTGCCAGTCACCAAGATCTTGAGCTACTGGTTCAGCAAGGACGATTCC
GACAGGATTTATTTTTCCGTATCCACGTTATGGATATTGTACTCCCACCATTACGTGAACGTGGACAGGACATCCTGTTA
TTAGCGAATCATTTTATCCAAAGAATTTGCCAAGAATGGGAACTGCCTGCCAAGACGTTATCGTCTCGTGCAGAGCAATT
TTTATTACAACAATATTTTCCTGGTAATGTGCGCGAACTACGCAATATTATTGAACGTGCAATCACGCTCAGCGATGATG
AAGCGATTGATCTAGCGCACTTACAAACAGCGCCATTACGCAGTCCAATTTCAATGCCATCAGCGCCATCTTATAGCCAA
GAAGAAGTTGAGCAGCCACAATACACCAGCCCAAGCACAAGTTCGAAAAAACTTCCACCTGAAGGTTTAGAGCGTTATTT
AGAAAATATTGAAAAAGAAGTGCTACTTAATGCATTAAATCTAACCCATTGGAATCGAACGCTCGCCGCGAAGAAACTCG
GGATGACCTTCCGTTCTTTGCGTTATCGTTTGAAAAAATTCGGATTAGATACTGAAGAAGATGACACCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-467)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Response regulator receiver domain (Response_reg) (8-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	84.244	100	0.842
pilR	Pseudomonas aeruginosa PAK	51.62	97.269	0.502