Detailed information
Bioinformatically predicted
Overview
| Name | ctsR | Type | Machinery gene |
| Locus tag | DSQ35_RS07510 | Genome accession | NZ_CP030866 |
| Coordinates | 1450793..1451104 (-) | Length | 103 a.a. |
| NCBI ID | WP_015016496.1 | Uniprot ID | A0A3X8SVA4 |
| Organism | Campylobacter jejuni strain CS17 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1445793..1456104
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSQ35_RS07485 (DSQ35_1486) | - | 1445802..1446665 (-) | 864 | Protein_1460 | type II secretion system F family protein | - |
| DSQ35_RS07490 (DSQ35_1487) | ctsE | 1446662..1448221 (-) | 1560 | WP_002864463.1 | GspE/PulE family protein | Machinery gene |
| DSQ35_RS07495 (DSQ35_1488) | ctsX | 1448211..1448798 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| DSQ35_RS07500 (DSQ35_1489) | ctsP | 1448802..1449410 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| DSQ35_RS07505 (DSQ35_1490) | ctsD | 1449403..1450815 (-) | 1413 | WP_002862130.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| DSQ35_RS07510 (DSQ35_1491) | ctsR | 1450793..1451104 (-) | 312 | WP_015016496.1 | hypothetical protein | Machinery gene |
| DSQ35_RS07515 (DSQ35_1492) | nifJ | 1451128..1454688 (-) | 3561 | WP_002851382.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| DSQ35_RS07520 (DSQ35_1493) | - | 1454781..1455422 (-) | 642 | WP_260383883.1 | HAD family hydrolase | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 12457.35 Da Isoelectric Point: 5.8722
>NTDB_id=301972 DSQ35_RS07510 WP_015016496.1 1450793..1451104(-) (ctsR) [Campylobacter jejuni strain CS17]
MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRHIKITAIILDKVKIYDRWYKKGDMIDDAIIYEINTKE
IKFQYDNLEIAIQINKNDKININ
MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRHIKITAIILDKVKIYDRWYKKGDMIDDAIIYEINTKE
IKFQYDNLEIAIQINKNDKININ
Nucleotide
Download Length: 312 bp
>NTDB_id=301972 DSQ35_RS07510 WP_015016496.1 1450793..1451104(-) (ctsR) [Campylobacter jejuni strain CS17]
TTGTGTTTTAGCACTTTGTTTGCACAAGATAATTTTGAAGAGTATTTTAAACTTATAGATAAAGAAAATCGTATAAATTT
TAATACTCTTCAAAACCCATTTGTGAATCCTACTTTTGAAAAATTAAGACATATTAAAATTACTGCAATTATACTTGATA
AAGTAAAAATTTATGATCGATGGTATAAAAAAGGTGATATGATTGATGATGCTATAATATATGAAATAAATACTAAAGAG
ATTAAATTCCAATATGATAATTTAGAAATTGCAATCCAAATAAATAAAAATGATAAGATTAATATTAATTAA
TTGTGTTTTAGCACTTTGTTTGCACAAGATAATTTTGAAGAGTATTTTAAACTTATAGATAAAGAAAATCGTATAAATTT
TAATACTCTTCAAAACCCATTTGTGAATCCTACTTTTGAAAAATTAAGACATATTAAAATTACTGCAATTATACTTGATA
AAGTAAAAATTTATGATCGATGGTATAAAAAAGGTGATATGATTGATGATGCTATAATATATGAAATAAATACTAAAGAG
ATTAAATTCCAATATGATAATTTAGAAATTGCAATCCAAATAAATAAAAATGATAAGATTAATATTAATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsR | Campylobacter jejuni subsp. jejuni 81-176 |
99.029 |
100 |
0.99 |