Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   ETT61_RS08775 Genome accession   NZ_CP035438
Coordinates   1688862..1689341 (-) Length   159 a.a.
NCBI ID   WP_247275530.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1683862..1694341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS08755 (ETT61_08745) - 1684031..1684636 (-) 606 WP_136020334.1 response regulator transcription factor -
  ETT61_RS08760 (ETT61_08750) - 1684617..1686179 (-) 1563 WP_136020335.1 hypothetical protein -
  ETT61_RS08765 (ETT61_08755) - 1686219..1688126 (-) 1908 WP_136020336.1 FtsX-like permease family protein -
  ETT61_RS08770 (ETT61_08760) - 1688128..1688865 (-) 738 WP_136020337.1 ABC transporter ATP-binding protein -
  ETT61_RS08775 (ETT61_08765) comA/nlmT 1688862..1689341 (-) 480 WP_247275530.1 ATP-binding cassette domain-containing protein Regulator
  ETT61_RS08780 (ETT61_08770) - 1689397..1691014 (-) 1618 Protein_1626 DUF4135 domain-containing protein -
  ETT61_RS08785 (ETT61_08775) - 1691096..1691251 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT61_RS08790 (ETT61_08780) lacG 1691755..1693161 (-) 1407 WP_136020339.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18445.10 Da        Isoelectric Point: 6.6365

>NTDB_id=301968 ETT61_RS08775 WP_247275530.1 1688862..1689341(-) (comA/nlmT) [Streptococcus pyogenes strain emm22.8]
MFDGDVMYNISLGRESVSGEQVIETCKRVSIYDDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGIHHCLYKNNEYYRDLYDSYMNNYQEEGIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=301968 ETT61_RS08775 WP_247275530.1 1688862..1689341(-) (comA/nlmT) [Streptococcus pyogenes strain emm22.8]
ATATTTGATGGGGATGTGATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAA
AAGGGTATCAATATATGATGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGATAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGTATTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGGGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(28-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

40.268

93.711

0.377
  rcrQ Streptococcus mutans UA159

38.667

94.34

0.365

Multiple sequence alignment