Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ETT61_RS07960 Genome accession   NZ_CP035438
Coordinates   1520717..1521751 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm22.8     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1515717..1526751
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT61_RS07925 (ETT61_07915) - 1516492..1516794 (-) 303 WP_136019929.1 YlxQ-related RNA-binding protein -
  ETT61_RS07930 (ETT61_07920) - 1516787..1517083 (-) 297 WP_002983486.1 YlxR family protein -
  ETT61_RS07935 (ETT61_07925) nusA 1517099..1518256 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  ETT61_RS07940 (ETT61_07930) rimP 1518431..1518967 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  ETT61_RS07950 (ETT61_07940) trmB 1519226..1519861 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ETT61_RS07955 (ETT61_07945) ccrZ 1519861..1520652 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  ETT61_RS07960 (ETT61_07950) pptB 1520717..1521751 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  ETT61_RS07965 (ETT61_07955) pptA 1521754..1522479 (-) 726 WP_136019928.1 ABC transporter ATP-binding protein Regulator
  ETT61_RS07970 (ETT61_07960) - 1522551..1522970 (+) 420 WP_047235448.1 HIT family protein -
  ETT61_RS07975 (ETT61_07965) - 1522967..1523323 (+) 357 WP_002988657.1 hypothetical protein -
  ETT61_RS07980 (ETT61_07970) - 1523434..1524708 (-) 1275 WP_020837594.1 LCP family protein -
  ETT61_RS07985 (ETT61_07975) - 1524717..1525241 (-) 525 WP_136019927.1 GNAT family N-acetyltransferase -
  ETT61_RS07990 (ETT61_07980) tsaE 1525216..1525677 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=301958 ETT61_RS07960 WP_002994331.1 1520717..1521751(-) (pptB) [Streptococcus pyogenes strain emm22.8]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=301958 ETT61_RS07960 WP_002994331.1 1520717..1521751(-) (pptB) [Streptococcus pyogenes strain emm22.8]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGGCTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427