Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   ETT62_RS07845 Genome accession   NZ_CP035437
Coordinates   1548732..1549211 (-) Length   159 a.a.
NCBI ID   WP_247442440.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm78.3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1543732..1554211
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT62_RS07825 (ETT62_07815) - 1543901..1544506 (-) 606 WP_002982799.1 response regulator transcription factor -
  ETT62_RS07830 (ETT62_07820) - 1544487..1546049 (-) 1563 WP_047235483.1 ATP-binding protein -
  ETT62_RS07835 (ETT62_07825) - 1546089..1547996 (-) 1908 WP_136120863.1 FtsX-like permease family protein -
  ETT62_RS07840 (ETT62_07830) - 1547998..1548735 (-) 738 WP_111713381.1 ABC transporter ATP-binding protein -
  ETT62_RS07845 (ETT62_07835) rcrQ 1548732..1549211 (-) 480 WP_247442440.1 ABC transporter ATP-binding protein Regulator
  ETT62_RS07850 (ETT62_07840) - 1549267..1550892 (-) 1626 WP_136120864.1 DUF4135 domain-containing protein -
  ETT62_RS07855 (ETT62_07845) - 1550976..1551131 (-) 156 WP_002982773.1 type A2 lanthipeptide -
  ETT62_RS07860 (ETT62_07850) lacG 1551634..1553040 (-) 1407 WP_063632517.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18628.39 Da        Isoelectric Point: 6.6377

>NTDB_id=301875 ETT62_RS07845 WP_247442440.1 1548732..1549211(-) (rcrQ) [Streptococcus pyogenes strain emm78.3]
MFDGDVMYNILLGRESVTEKQVIEICKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTERIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEEIK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=301875 ETT62_RS07845 WP_247442440.1 1548732..1549211(-) (rcrQ) [Streptococcus pyogenes strain emm78.3]
ATATTTGATGGGGATGTGATGTATAACATTTTGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAATCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGAGATAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

39.333

94.34

0.371
  comA Streptococcus pneumoniae TIGR4

38.926

93.711

0.365
  comA Streptococcus pneumoniae Rx1

38.926

93.711

0.365
  comA Streptococcus mitis NCTC 12261

38.926

93.711

0.365
  comA Streptococcus pneumoniae R6

38.926

93.711

0.365
  comA Streptococcus mitis SK321

38.926

93.711

0.365
  comA Streptococcus pneumoniae D39

38.926

93.711

0.365