Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | DSB67_RS22205 | Genome accession | NZ_CP030789 |
| Coordinates | 1312268..1313365 (+) | Length | 365 a.a. |
| NCBI ID | WP_010644882.1 | Uniprot ID | - |
| Organism | Vibrio campbellii strain DS40M4 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1307268..1318365
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB67_RS22175 (DSB67_22180) | - | 1307533..1308522 (+) | 990 | WP_010644892.1 | Gfo/Idh/MocA family protein | - |
| DSB67_RS22180 (DSB67_22185) | - | 1308616..1309953 (-) | 1338 | WP_010644891.1 | MATE family efflux transporter | - |
| DSB67_RS22185 (DSB67_22190) | - | 1310077..1310391 (-) | 315 | WP_005373603.1 | DUF496 family protein | - |
| DSB67_RS22190 (DSB67_22195) | - | 1310630..1310833 (+) | 204 | WP_029388643.1 | hypothetical protein | - |
| DSB67_RS22195 (DSB67_22200) | - | 1310927..1311580 (+) | 654 | WP_005532538.1 | YceH family protein | - |
| DSB67_RS22200 (DSB67_22205) | - | 1311577..1311906 (+) | 330 | WP_010644884.1 | GIY-YIG nuclease family protein | - |
| DSB67_RS22205 (DSB67_22210) | luxP | 1312268..1313365 (+) | 1098 | WP_010644882.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| DSB67_RS22210 (DSB67_22215) | luxQ | 1313365..1315944 (+) | 2580 | WP_010644880.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| DSB67_RS22215 (DSB67_22220) | - | 1316056..1316718 (-) | 663 | WP_010644878.1 | PilZ domain-containing protein | - |
| DSB67_RS22220 (DSB67_22225) | - | 1316812..1317738 (-) | 927 | WP_010644876.1 | DMT family transporter | - |
| DSB67_RS22225 (DSB67_22230) | - | 1317888..1318343 (+) | 456 | WP_010644874.1 | Lrp/AsnC family transcriptional regulator | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41535.89 Da Isoelectric Point: 5.4809
>NTDB_id=301532 DSB67_RS22205 WP_010644882.1 1312268..1313365(+) (luxP) [Vibrio campbellii strain DS40M4]
MKKALLFSLISIVGFSPVSQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDATKASLAKHPDVDFIYACSTDVALGAVDALAELGREEIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIETLKKRAFRYSDN
MKKALLFSLISIVGFSPVSQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDATKASLAKHPDVDFIYACSTDVALGAVDALAELGREEIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIETLKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=301532 DSB67_RS22205 WP_010644882.1 1312268..1313365(+) (luxP) [Vibrio campbellii strain DS40M4]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATAGTCGGTTTTTCTCCAGTGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACTAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGCCCGCTCAAAATATCAGTGGTTTACCCAGGGCAACAAGTTTCAGAT
TACTGGGTCAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
GGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGCGTACTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGCGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCCACC
AAGCAATCCGGCTATGATGCTACGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTAGCATTGGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAGGAAATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGATGCTATCCAGAAGGGTGATTTAGATATCACTGTCATGCGTATGAATGACGATACTGGCATAGCTATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAACGCTGAAAAAGCGCGCATTTAGATACTCAGATAATTGA
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATAGTCGGTTTTTCTCCAGTGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACTAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGCCCGCTCAAAATATCAGTGGTTTACCCAGGGCAACAAGTTTCAGAT
TACTGGGTCAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
GGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGCGTACTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGCGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCCACC
AAGCAATCCGGCTATGATGCTACGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTAGCATTGGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAGGAAATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGATGCTATCCAGAAGGGTGATTTAGATATCACTGTCATGCGTATGAATGACGATACTGGCATAGCTATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAACGCTGAAAAAGCGCGCATTTAGATACTCAGATAATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
64.658 |
100 |
0.647 |