Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | DSB67_RS14220 | Genome accession | NZ_CP030788 |
| Coordinates | 2941597..2942229 (+) | Length | 210 a.a. |
| NCBI ID | WP_005381432.1 | Uniprot ID | U2ZZI4 |
| Organism | Vibrio campbellii strain DS40M4 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2936597..2947229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DSB67_RS14200 (DSB67_14205) | - | 2938493..2938972 (+) | 480 | WP_005432772.1 | TIGR02444 family protein | - |
| DSB67_RS14205 (DSB67_14210) | - | 2939073..2940080 (+) | 1008 | WP_010648945.1 | hydrolase | - |
| DSB67_RS14210 (DSB67_14215) | - | 2940151..2940363 (+) | 213 | WP_005432763.1 | YheU family protein | - |
| DSB67_RS14215 (DSB67_14220) | - | 2940488..2941357 (+) | 870 | WP_005432770.1 | phosphoribulokinase | - |
| DSB67_RS14220 (DSB67_14225) | crp | 2941597..2942229 (+) | 633 | WP_005381432.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| DSB67_RS14225 (DSB67_14230) | - | 2942434..2943225 (-) | 792 | WP_010648942.1 | DUF1338 domain-containing protein | - |
| DSB67_RS14230 (DSB67_14235) | astD | 2943490..2944947 (-) | 1458 | WP_010648940.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| DSB67_RS14235 (DSB67_14240) | astA | 2944976..2945995 (-) | 1020 | WP_010648939.1 | arginine N-succinyltransferase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23665.48 Da Isoelectric Point: 7.8388
>NTDB_id=301523 DSB67_RS14220 WP_005381432.1 2941597..2942229(+) (crp) [Vibrio campbellii strain DS40M4]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=301523 DSB67_RS14220 WP_005381432.1 2941597..2942229(+) (crp) [Vibrio campbellii strain DS40M4]
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCGGGCGAAAAAGCAGAGACTTTGTACTACATCGTTAAAGGTTCTGTTGCGGTTCTTATCAAAG
ACGAAGAAGGTAAGGAAATGATCCTTTCTTACCTAAACCAAGGCGACTTCATTGGTGAGCTTGGTCTGTTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTGGCAGAGATTTCTTTCAAGAAATTCCGTCAACTTAT
CCAAGTTAACCCAGACATCCTAATGCGCCTTTCTGCGCAAATGGCTCGTCGTCTACAAGTTACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACTCTTCTGAACCTTGCTAAACAGCCAGATGCGATGACGCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAGATTGGTCAAATTGTTGGCTGTTCTCGTGAGACAGTAGGCCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATTTCTGCGCACGGTAAAACTATCGTTGTTTACGGGACTCGTTAA
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCGGGCGAAAAAGCAGAGACTTTGTACTACATCGTTAAAGGTTCTGTTGCGGTTCTTATCAAAG
ACGAAGAAGGTAAGGAAATGATCCTTTCTTACCTAAACCAAGGCGACTTCATTGGTGAGCTTGGTCTGTTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTGGCAGAGATTTCTTTCAAGAAATTCCGTCAACTTAT
CCAAGTTAACCCAGACATCCTAATGCGCCTTTCTGCGCAAATGGCTCGTCGTCTACAAGTTACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACTCTTCTGAACCTTGCTAAACAGCCAGATGCGATGACGCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAGATTGGTCAAATTGTTGGCTGTTCTCGTGAGACAGTAGGCCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATTTCTGCGCACGGTAAAACTATCGTTGTTTACGGGACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
98.095 |
100 |
0.981 |
| crp | Haemophilus influenzae Rd KW20 |
75.49 |
97.143 |
0.733 |
| crp | Acinetobacter baumannii D1279779 |
47.826 |
98.571 |
0.471 |