Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | DNH82_RS02910 | Genome accession | NZ_CP030374 |
| Coordinates | 669387..669893 (+) | Length | 168 a.a. |
| NCBI ID | WP_014614920.1 | Uniprot ID | A0A161W350 |
| Organism | Staphylococcus pseudintermedius strain AH18 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 664387..674893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DNH82_RS02890 (DNH82_02945) | - | 665414..666349 (+) | 936 | WP_014614924.1 | ABC transporter ATP-binding protein | - |
| DNH82_RS02895 (DNH82_02950) | - | 666342..667151 (+) | 810 | WP_096533324.1 | ABC transporter permease subunit | - |
| DNH82_RS02900 (DNH82_02955) | sbi | 667205..668731 (-) | 1527 | WP_096533325.1 | Ig-binding surface protein Sbi/SpsK | - |
| DNH82_RS02905 (DNH82_02960) | rpsF | 669068..669364 (+) | 297 | WP_014614921.1 | 30S ribosomal protein S6 | - |
| DNH82_RS02910 (DNH82_02965) | ssbA | 669387..669893 (+) | 507 | WP_014614920.1 | single-stranded DNA-binding protein | Machinery gene |
| DNH82_RS02915 (DNH82_02970) | rpsR | 669947..670189 (+) | 243 | WP_014614919.1 | 30S ribosomal protein S18 | - |
| DNH82_RS02920 (DNH82_02975) | - | 670380..671471 (+) | 1092 | WP_096533326.1 | Abi family protein | - |
| DNH82_RS02925 (DNH82_02980) | - | 671685..673676 (-) | 1992 | WP_096533327.1 | catalase | - |
| DNH82_RS12525 | - | 673845..673976 (+) | 132 | WP_015728521.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18738.42 Da Isoelectric Point: 5.1957
>NTDB_id=301064 DNH82_RS02910 WP_014614920.1 669387..669893(+) (ssbA) [Staphylococcus pseudintermedius strain AH18]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNFLFKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKSQNQRHANQNQGNQFDSYGQGFGGQQQGQNSSYQNNHQQPANDNPFANANGPID
ISDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNFLFKGSLAGVDGRLQSR
SYENQEGRRVFVTEVVCDSVQFLEPKSQNQRHANQNQGNQFDSYGQGFGGQQQGQNSSYQNNHQQPANDNPFANANGPID
ISDDDLPF
Nucleotide
Download Length: 507 bp
>NTDB_id=301064 DNH82_RS02910 WP_014614920.1 669387..669893(+) (ssbA) [Staphylococcus pseudintermedius strain AH18]
ATGCTTAATAGAGTCGTATTAGTAGGTCGCTTAACTAAAGATCCAGAATACAGAACGACACCCTCAGGCGTAAGTGTAGC
GACATTTACCTTAGCGGTTAATCGTACATTTACGAATGCGCAAGGGGAACGTGAAGCAGACTTCATTAACTGCGTTGTTT
TCCGTAAACAAGCAGAAAATGTAAACAACTTTTTGTTTAAAGGAAGTCTCGCTGGCGTTGACGGTCGCTTACAATCACGC
AGTTACGAAAACCAAGAAGGCCGACGTGTATTCGTCACTGAAGTGGTATGTGATAGTGTTCAATTCCTTGAGCCAAAATC
ACAAAACCAACGTCACGCGAATCAAAACCAAGGCAATCAATTCGATAGCTACGGTCAAGGATTCGGTGGACAACAACAAG
GCCAAAATTCGTCTTATCAAAACAATCATCAGCAACCAGCTAACGATAATCCATTTGCGAATGCGAACGGTCCTATCGAT
ATTAGCGATGATGATTTACCATTCTAA
ATGCTTAATAGAGTCGTATTAGTAGGTCGCTTAACTAAAGATCCAGAATACAGAACGACACCCTCAGGCGTAAGTGTAGC
GACATTTACCTTAGCGGTTAATCGTACATTTACGAATGCGCAAGGGGAACGTGAAGCAGACTTCATTAACTGCGTTGTTT
TCCGTAAACAAGCAGAAAATGTAAACAACTTTTTGTTTAAAGGAAGTCTCGCTGGCGTTGACGGTCGCTTACAATCACGC
AGTTACGAAAACCAAGAAGGCCGACGTGTATTCGTCACTGAAGTGGTATGTGATAGTGTTCAATTCCTTGAGCCAAAATC
ACAAAACCAACGTCACGCGAATCAAAACCAAGGCAATCAATTCGATAGCTACGGTCAAGGATTCGGTGGACAACAACAAG
GCCAAAATTCGTCTTATCAAAACAATCATCAGCAACCAGCTAACGATAATCCATTTGCGAATGCGAACGGTCCTATCGAT
ATTAGCGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.773 |
100 |
0.679 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
56.14 |
100 |
0.571 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.182 |
65.476 |
0.381 |