Detailed information    

insolico Bioinformatically predicted

Overview

Name   scnR   Type   Regulator
Locus tag   ETT71_RS02810 Genome accession   NZ_CP035428
Coordinates   507115..507813 (-) Length   232 a.a.
NCBI ID   WP_085613747.1    Uniprot ID   O31050
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   regulate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 502115..512813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS09330 (ETT71_02780) - 502527..503486 (+) 960 WP_227868524.1 hypothetical protein -
  ETT71_RS02795 (ETT71_02785) - 503859..504985 (-) 1127 Protein_496 IS3 family transposase -
  ETT71_RS02800 (ETT71_02790) - 505005..505520 (+) 516 WP_136022160.1 helical hairpin domain-containing protein -
  ETT71_RS02805 (ETT71_02795) - 505736..507097 (-) 1362 WP_136093702.1 sensor histidine kinase KdpD -
  ETT71_RS02810 (ETT71_02800) scnR 507115..507813 (-) 699 WP_085613747.1 response regulator transcription factor Regulator
  ETT71_RS02815 (ETT71_02805) - 508011..508166 (+) 156 WP_023612114.1 lacticin 481 family lantibiotic -
  ETT71_RS02820 (ETT71_02810) - 508366..508485 (+) 120 WP_136093703.1 type A2 lanthipeptide -
  ETT71_RS02825 (ETT71_02815) - 508509..511322 (+) 2814 WP_227868826.1 type 2 lanthipeptide synthetase LanM family protein -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 26246.39 Da        Isoelectric Point: 6.1274

>NTDB_id=300985 ETT71_RS02810 WP_085613747.1 507115..507813(-) (scnR) [Streptococcus pyogenes strain emmSTG866.1]
MNFESQLLNKRILIVDDDVALSKSIKEVLISRDFKNISCAYSISEGIDIFSVSKIDLIILDVMLPDGEGHLLAKYIRKYS
DVPILFLTAKNNPDDEIRGLESGGDDYVTKPFLPKSLTYRIIALLRRAYKDESELIELTNCTIDLNNASVEKNGQHLSLT
PTEIQILRKLFSNKNYIASTESICDTVWGLESLGYEKSLMVHIRNIREKIEITPSKPNHLITVKGLGYKLVI

Nucleotide


Download         Length: 699 bp        

>NTDB_id=300985 ETT71_RS02810 WP_085613747.1 507115..507813(-) (scnR) [Streptococcus pyogenes strain emmSTG866.1]
ATGAATTTTGAGTCTCAATTATTGAATAAACGCATATTGATTGTCGACGATGATGTCGCACTTAGCAAATCAATTAAAGA
GGTACTTATCAGTCGGGATTTCAAGAATATCAGCTGTGCTTATAGTATAAGCGAAGGAATTGATATCTTCTCAGTTTCTA
AAATTGATCTCATTATTTTAGATGTTATGCTACCAGATGGAGAAGGGCACTTACTTGCAAAATACATTAGGAAATATTCA
GATGTGCCAATTCTCTTTTTAACAGCCAAAAACAATCCTGATGATGAAATTCGAGGACTTGAATCCGGAGGGGATGATTA
TGTTACGAAGCCATTTCTTCCCAAATCTTTAACATATCGTATTATTGCACTGTTGAGAAGGGCTTATAAAGATGAATCGG
AACTAATTGAGCTAACAAATTGTACCATAGACTTAAACAATGCAAGTGTTGAAAAAAATGGTCAACATTTGTCACTCACT
CCAACAGAAATACAAATCCTACGAAAATTATTTTCAAATAAAAATTATATTGCATCAACTGAATCGATTTGTGATACCGT
TTGGGGACTTGAGAGCCTTGGCTACGAAAAATCACTTATGGTACATATTCGTAATATCAGAGAAAAAATCGAGATAACTC
CATCTAAGCCAAATCATCTTATTACTGTAAAAGGGCTTGGTTATAAACTAGTTATATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(154-230)

Response regulator receiver domain (Response_reg)

(12-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O31050

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  scnR Streptococcus mutans UA159

40.948

100

0.409
  vicR Streptococcus mutans UA159

38.528

99.569

0.384
  micA Streptococcus pneumoniae Cp1015

37.826

99.138

0.375