Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   CSC44_RS12450 Genome accession   NZ_CP030327
Coordinates   2591891..2592298 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain AR_458     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2586891..2597298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC44_RS12430 (CSC44_2510) pilK 2587823..2588698 (-) 876 WP_023115713.1 type 4 fimbrial methyltransferase PilK -
  CSC44_RS12435 (CSC44_2511) pilJ 2588759..2590807 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  CSC44_RS12440 (CSC44_2512) - 2590892..2591428 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  CSC44_RS12445 (CSC44_2513) pilH 2591479..2591844 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  CSC44_RS12450 (CSC44_2514) pilG 2591891..2592298 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  CSC44_RS12455 (CSC44_2515) gshB 2592553..2593506 (+) 954 WP_003100943.1 glutathione synthase -
  CSC44_RS12460 (CSC44_2516) - 2593653..2594546 (+) 894 WP_003162015.1 energy transducer TonB -
  CSC44_RS12465 (CSC44_2517) - 2594595..2595164 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  CSC44_RS12470 (CSC44_2518) ruvX 2595164..2595598 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  CSC44_RS12475 (CSC44_2519) pyrR 2595710..2596222 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CSC44_RS12480 (CSC44_2520) - 2596246..2597250 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=300873 CSC44_RS12450 WP_003084583.1 2591891..2592298(-) (pilG) [Pseudomonas aeruginosa strain AR_458]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=300873 CSC44_RS12450 WP_003084583.1 2591891..2592298(-) (pilG) [Pseudomonas aeruginosa strain AR_458]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment