Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ETA15_RS16740 Genome accession   NZ_CP035403
Coordinates   3112026..3112889 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain SRCM103581     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3107026..3117889
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS16705 (ETA15_16705) mrpE 3107194..3107670 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  ETA15_RS16710 (ETA15_16710) mrpF 3107670..3107954 (+) 285 WP_041052851.1 Na(+)/H(+) antiporter subunit F1 -
  ETA15_RS16715 (ETA15_16715) mnhG 3107938..3108312 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ETA15_RS16720 (ETA15_16720) yuxO 3108351..3108731 (-) 381 WP_041052848.1 hotdog fold thioesterase -
  ETA15_RS16725 (ETA15_16725) comA 3108750..3109394 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ETA15_RS16730 (ETA15_16730) comP 3109475..3111787 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  ETA15_RS16735 (ETA15_16735) comX 3111803..3112024 (-) 222 WP_014480704.1 competence pheromone ComX -
  ETA15_RS16740 (ETA15_16740) comQ 3112026..3112889 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ETA15_RS16745 (ETA15_16745) degQ 3113074..3113214 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ETA15_RS22245 - 3113436..3113498 (+) 63 Protein_3225 hypothetical protein -
  ETA15_RS16750 (ETA15_16750) - 3113676..3114044 (+) 369 WP_017695529.1 hypothetical protein -
  ETA15_RS16755 (ETA15_16755) pdeH 3114020..3115249 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  ETA15_RS16760 (ETA15_16760) pncB 3115386..3116858 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  ETA15_RS16765 (ETA15_16765) pncA 3116874..3117425 (-) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=299835 ETA15_RS16740 WP_014480705.1 3112026..3112889(-) (comQ) [Bacillus subtilis strain SRCM103581]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=299835 ETA15_RS16740 WP_014480705.1 3112026..3112889(-) (comQ) [Bacillus subtilis strain SRCM103581]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439