Detailed information NTG0299684

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BVDSYZ_RS02150
• Genome accession: NZ_CP030150
• Coordinates: 450007..451155 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain DSYZ
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 445007..456155

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVDSYZ_RS02130 (BVDSYZ_02130)	-	445415..446098 (-)	684	WP_015416808.1	ABC transporter ATP-binding protein	-
BVDSYZ_RS02135 (BVDSYZ_02135)	-	446113..447549 (-)	1437	WP_015416809.1	ABC transporter permease	-
BVDSYZ_RS02140 (BVDSYZ_02140)	-	447762..448445 (+)	684	WP_007410267.1	response regulator transcription factor	-
BVDSYZ_RS02145 (BVDSYZ_02145)	-	448432..449865 (+)	1434	WP_162303988.1	HAMP domain-containing sensor histidine kinase	-
BVDSYZ_RS02150 (BVDSYZ_02150)	rapC	450007..451155 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
BVDSYZ_RS02155 (BVDSYZ_02155)	phrC	451139..451258 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BVDSYZ_RS02160 (BVDSYZ_02160)	-	451407..451502 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
BVDSYZ_RS02165 (BVDSYZ_02165)	-	451597..452961 (-)	1365	WP_042634827.1	aspartate kinase	-
BVDSYZ_RS02170 (BVDSYZ_02170)	ceuB	453375..454328 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
BVDSYZ_RS02175 (BVDSYZ_02175)	-	454318..455265 (+)	948	WP_040238557.1	iron chelate uptake ABC transporter family permease subunit	-
BVDSYZ_RS02180 (BVDSYZ_02180)	-	455259..456017 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=299684 BVDSYZ_RS02150 WP_007410270.1 450007..451155(+) (rapC) [Bacillus velezensis strain DSYZ]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=299684 BVDSYZ_RS02150 WP_007410270.1 450007..451155(+) (rapC) [Bacillus velezensis strain DSYZ]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568