Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   DP112_RS09565 Genome accession   NZ_CP030125
Coordinates   1937925..1939184 (-) Length   419 a.a.
NCBI ID   WP_105143703.1    Uniprot ID   -
Organism   Streptococcus suis strain HA1003     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1932925..1944184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DP112_RS09540 (DP112_09545) dhaK 1933083..1934072 (+) 990 WP_114866860.1 dihydroxyacetone kinase subunit DhaK -
  DP112_RS09545 (DP112_09550) dhaL 1934083..1934658 (+) 576 WP_114866861.1 dihydroxyacetone kinase subunit DhaL -
  DP112_RS09550 (DP112_09555) dhaM 1934655..1935029 (+) 375 WP_044680584.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  DP112_RS09555 (DP112_09560) - 1935039..1935749 (+) 711 WP_014638689.1 MIP/aquaporin family protein -
  DP112_RS09560 (DP112_09565) - 1935829..1937691 (-) 1863 WP_105121427.1 proline--tRNA ligase -
  DP112_RS09565 (DP112_09570) eeP 1937925..1939184 (-) 1260 WP_105143703.1 RIP metalloprotease RseP Regulator
  DP112_RS09570 (DP112_09575) - 1939194..1940000 (-) 807 WP_014638692.1 phosphatidate cytidylyltransferase -
  DP112_RS09575 (DP112_09580) - 1940010..1940765 (-) 756 WP_114866862.1 isoprenyl transferase -
  DP112_RS09580 (DP112_09585) yajC 1940879..1941202 (-) 324 WP_014638693.1 preprotein translocase subunit YajC -
  DP112_RS09585 (DP112_09590) - 1941312..1942604 (-) 1293 WP_002937782.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 44916.28 Da        Isoelectric Point: 5.9847

>NTDB_id=299503 DP112_RS09565 WP_105143703.1 1937925..1939184(-) (eeP) [Streptococcus suis strain HA1003]
MKGILAFIFIFGVIVVVHEFGHFYFAKKAGILVREFAIGMGPKIFAHTGKDGTLYTIRILPLGGYVRMAGWGEDKTEIKT
GSPASLSLNEAGVVTRINLSGKQLDSLSLPMNVTSFDFEEKLEITGLVLEESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGRLMTNFAGPMNNFILGILVFIILFFMQGGVANPSSNAVSITEGGALQAAGVVTGDKILSVNGNKTDSYTEVAT
IISKAATDATTAPSFDLVVEHDGKNRHVSVTAEQVDGAYRIGISPILKTGFVDKIVGGFQEAGATALRVVTALKNLIANF
DVKQLGGPVAIYKVSSQAAEFGLVSVLGLMAALSINLGIFNLIPIPALDGGKIVMNILEAIRRKPLKPETESYITLAGVA
VMVVLMIVVTWNDIIRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=299503 DP112_RS09565 WP_105143703.1 1937925..1939184(-) (eeP) [Streptococcus suis strain HA1003]
ATGAAGGGAATTTTAGCATTTATATTTATATTTGGTGTGATTGTGGTTGTCCATGAATTTGGTCATTTCTACTTCGCCAA
GAAAGCGGGTATCCTTGTGAGGGAATTTGCGATTGGGATGGGTCCCAAAATTTTCGCTCATACGGGTAAGGATGGGACGC
TTTACACCATCCGTATTCTTCCTCTAGGTGGCTATGTTCGAATGGCTGGATGGGGTGAAGATAAGACAGAGATTAAGACA
GGTAGTCCTGCCAGCCTCAGCTTGAATGAAGCTGGTGTTGTGACGCGGATTAATTTGTCTGGTAAGCAACTGGATAGTCT
CAGTTTGCCAATGAATGTAACCAGTTTTGACTTTGAAGAAAAATTGGAAATCACAGGCTTGGTCTTGGAAGAAAGCAAGA
CCTATAAGGTTGATCACGATGCCACGATTGTAGAGGAAGATGGAACAGAAGTTCGGATTGCTCCACTTGATGTTCAGTAT
CAAAATGCGACAGTCTGGGGTCGGTTGATGACCAACTTTGCGGGGCCCATGAATAATTTTATTCTAGGGATTCTAGTATT
TATTATTTTGTTCTTCATGCAAGGCGGGGTTGCCAACCCATCAAGCAATGCAGTAAGTATTACTGAAGGTGGTGCTTTGC
AGGCTGCAGGTGTTGTTACAGGGGACAAGATTCTTTCGGTCAATGGGAACAAGACAGACAGCTACACAGAAGTTGCAACG
ATTATTAGCAAAGCAGCGACAGATGCAACAACAGCCCCAAGCTTTGATTTGGTTGTTGAGCATGATGGGAAAAACCGTCA
TGTCTCCGTTACTGCTGAACAAGTAGATGGGGCTTATCGAATTGGTATCTCACCGATTTTGAAAACTGGTTTCGTTGATA
AAATTGTCGGTGGTTTCCAAGAAGCGGGAGCGACAGCTCTTAGGGTTGTGACAGCTTTGAAGAATCTAATTGCAAACTTT
GATGTTAAGCAGTTGGGGGGACCGGTTGCTATTTACAAAGTAAGTTCTCAAGCGGCTGAATTTGGTTTGGTTTCTGTATT
GGGGCTAATGGCTGCGCTCTCCATTAACCTTGGAATCTTTAATTTGATTCCAATTCCAGCCTTGGATGGTGGTAAGATTG
TTATGAATATTCTGGAAGCCATTCGCAGAAAACCACTCAAACCAGAGACGGAATCTTATATCACTCTAGCAGGTGTAGCC
GTTATGGTGGTTCTTATGATAGTAGTCACTTGGAATGATATTATAAGAGTCTTCTTCTAA

Domains


Predicted by InterproScan.

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

65.476

100

0.656

  eeP Streptococcus thermophilus LMG 18311

65.476

100

0.656


Multiple sequence alignment