Detailed information NTG0299493

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: DP112_RS07550
• Genome accession: NZ_CP030125
• Coordinates: 1503705..1504709 (-)
• Length: 334 a.a.
• NCBI ID: WP_004298830.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HA1003
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	1492320..1510797	1503705..1504709	within	0

Gene organization within MGE regions

Location: 1492320..1510797

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DP112_RS07520 (DP112_07520)	-	1492320..1492694 (-)	375	WP_024384912.1	hypothetical protein	-
DP112_RS07525 (DP112_07525)	-	1492709..1494022 (-)	1314	WP_024384913.1	glycosyltransferase family 4 protein	-
DP112_RS07530 (DP112_07530)	-	1494023..1495021 (-)	999	WP_014637671.1	glycosyltransferase	-
DP112_RS11290	-	1495298..1498579 (+)	3282	WP_241146849.1	hypothetical protein	-
DP112_RS07540 (DP112_07540)	-	1500625..1501986 (-)	1362	WP_114866698.1	HAMP domain-containing sensor histidine kinase	-
DP112_RS07545 (DP112_07545)	-	1501987..1502637 (-)	651	WP_024384330.1	response regulator transcription factor	-
DP112_RS07550 (DP112_07550)	ccpA	1503705..1504709 (-)	1005	WP_004298830.1	catabolite control protein A	Regulator
DP112_RS07555 (DP112_07555)	-	1504919..1506004 (+)	1086	WP_024384331.1	Xaa-Pro peptidase family protein	-
DP112_RS11190	-	1506177..1506281 (-)	105	WP_172005209.1	LPXTG cell wall anchor domain-containing protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36786.97 Da
• Isoelectric Point: 5.5173

>NTDB_id=299493 DP112_RS07550 WP_004298830.1 1503705..1504709(-) (ccpA) [Streptococcus suis strain HA1003]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGIKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide

• Length: 1005 bp

>NTDB_id=299493 DP112_RS07550 WP_004298830.1 1503705..1504709(-) (ccpA) [Streptococcus suis strain HA1003]
ATGTTAAACACTGACGATACGGTAACGATTTATGACGTTGCCCGCGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCGA
ATGCTGTTGCACGTGGCTTGGCCAGCAAGAAGACTACCACTGTGGGGGTTGTGATTCCAAACATTGCTAATGCTTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTAGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGTGTCAACATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTGTTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGGCCGCTTGTAGATGACATCAATGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCATCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCGCTATACGATATTGGTGCAATTGCTATGCGCATGCTCACCAAGATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (9-54)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-333)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	79.88	99.701	0.796
ccpA	Streptococcus gordonii str. Challis substr. CH1	79.279	99.701	0.79
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	58.912	99.102	0.584