Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   DP111_RS07055 Genome accession   NZ_CP030124
Coordinates   1390869..1391873 (-) Length   334 a.a.
NCBI ID   WP_002935813.1    Uniprot ID   A0A0K2E7G3
Organism   Streptococcus suis strain SH1510     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1385869..1396873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DP111_RS07035 (DP111_07035) - 1386047..1386421 (-) 375 WP_024394420.1 hypothetical protein -
  DP111_RS07040 (DP111_07040) - 1386436..1387749 (-) 1314 WP_114876540.1 glycosyltransferase family 4 protein -
  DP111_RS07045 (DP111_07045) - 1387750..1388748 (-) 999 WP_024378360.1 glycosyltransferase -
  DP111_RS07050 (DP111_07050) - 1389057..1390436 (+) 1380 WP_114876541.1 FctA domain-containing protein -
  DP111_RS07055 (DP111_07055) ccpA 1390869..1391873 (-) 1005 WP_002935813.1 catabolite control protein A Regulator
  DP111_RS07060 (DP111_07060) - 1392082..1393167 (+) 1086 WP_024376342.1 Xaa-Pro peptidase family protein -
  DP111_RS07070 (DP111_07070) tgt 1393488..1394630 (-) 1143 WP_002935810.1 tRNA guanosine(34) transglycosylase Tgt -
  DP111_RS07080 (DP111_07080) - 1395234..1396076 (+) 843 WP_024394424.1 DUF975 family protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36772.94 Da        Isoelectric Point: 5.5173

>NTDB_id=299440 DP111_RS07055 WP_002935813.1 1390869..1391873(-) (ccpA) [Streptococcus suis strain SH1510]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=299440 DP111_RS07055 WP_002935813.1 1390869..1391873(-) (ccpA) [Streptococcus suis strain SH1510]
ATGTTAAACACTGATGATACGGTTACGATTTACGATGTCGCCCGTGAAGCTGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCGCGTGGCTTGGCAAGTAAAAAAACGACAACTGTAGGGGTTGTGATTCCAAATATTGCTAACGCCTATTTT
GCAACCTTGGCCAAAGGTATTGATGATATTGCCGATATGTACAAATACAATATTGTCTTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTAAATACCCTATTCTCAAAACAGGTGGACGGGATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGACTATGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGACCGCTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAGGGCTACGCTCTAGCAGAACGTATTTTGAATGCC
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGCGTCAAGGT
TCCAGAAGACTTTGAAATCATTACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATATGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTGGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)

Bacterial regulatory proteins, lacI family (LacI)

(9-54)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K2E7G3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

80.18

99.701

0.799
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

99.701

0.793
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

59.215

99.102

0.587

Multiple sequence alignment