Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ETA10_RS15245 Genome accession   NZ_CP035397
Coordinates   2816085..2817089 (-) Length   334 a.a.
NCBI ID   WP_017695488.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103773     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2811085..2822089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA10_RS15220 (ETA10_15220) acuA 2812012..2812644 (+) 633 WP_003229296.1 acetoin utilization protein acetyltransferase AcuA -
  ETA10_RS15225 (ETA10_15225) acuB 2812671..2813315 (+) 645 WP_129110544.1 acetoin utilization AcuB family protein -
  ETA10_RS15230 (ETA10_15230) acuC 2813312..2814475 (+) 1164 WP_015714526.1 acetoin utilization protein AcuC -
  ETA10_RS15235 (ETA10_15235) motS 2814486..2815214 (-) 729 WP_041056267.1 flagellar motor protein MotS -
  ETA10_RS15240 (ETA10_15240) motP 2815204..2816022 (-) 819 WP_015251446.1 flagellar motor protein MotP -
  ETA10_RS15245 (ETA10_15245) ccpA 2816085..2817089 (-) 1005 WP_017695488.1 catabolite control protein A Regulator
  ETA10_RS15250 (ETA10_15250) aroX 2817365..2818441 (-) 1077 WP_069964250.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  ETA10_RS15255 (ETA10_15255) ytxJ 2818677..2819003 (-) 327 WP_032726420.1 bacillithiol system redox-active protein YtxJ -
  ETA10_RS15260 (ETA10_15260) ytxH 2819027..2819482 (-) 456 WP_004398549.1 YtxH domain-containing protein -
  ETA10_RS15265 (ETA10_15265) ytxG 2819513..2819935 (-) 423 WP_003229276.1 DUF948 domain-containing protein -
  ETA10_RS15270 (ETA10_15270) murC 2820097..2821395 (-) 1299 WP_003229274.1 UDP-N-acetylmuramate--L-alanine ligase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36970.36 Da        Isoelectric Point: 5.0249

>NTDB_id=299231 ETA10_RS15245 WP_017695488.1 2816085..2817089(-) (ccpA) [Bacillus subtilis strain SRCM103773]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMTEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=299231 ETA10_RS15245 WP_017695488.1 2816085..2817089(-) (ccpA) [Bacillus subtilis strain SRCM103773]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGAAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGACTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCCCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCTGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGACAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCTGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGCTTTGATAATACAAGATTAAGCCTCATGGTTCGTCCGCAGCTTTCAACAGTTGTTCAGC
CGACATATGATATTGGCGCCGTTGCGATGAGATTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATAGAGCTAAGAAAGTCAACCAAGTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

54.545

98.802

0.539

  ccpA Streptococcus gordonii str. Challis substr. CH1

53.636

98.802

0.53

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

50.602

99.401

0.503


Multiple sequence alignment