Detailed information NTG0299144

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETA10_RS05165
• Genome accession: NZ_CP035397
• Coordinates: 980307..981479 (+)
• Length: 390 a.a.
• NCBI ID: WP_087614474.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103773
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 975307..986479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA10_RS05135 (ETA10_05135)	-	975410..976399 (+)	990	WP_033881969.1	bifunctional lytic transglycosylase/C40 family peptidase	-
ETA10_RS05140 (ETA10_05140)	-	976414..976920 (+)	507	WP_043858078.1	hypothetical protein	-
ETA10_RS05145 (ETA10_05145)	-	976983..977366 (+)	384	WP_087614470.1	cystatin-like fold lipoprotein	-
ETA10_RS05150 (ETA10_05150)	-	977678..978442 (+)	765	WP_087614471.1	hypothetical protein	-
ETA10_RS05155 (ETA10_05155)	-	978486..978896 (+)	411	WP_087614472.1	hypothetical protein	-
ETA10_RS05160 (ETA10_05160)	-	979205..979933 (+)	729	WP_087614473.1	DUF4145 domain-containing protein	-
ETA10_RS05165 (ETA10_05165)	rapF	980307..981479 (+)	1173	WP_087614474.1	Rap family tetratricopeptide repeat protein	Regulator
ETA10_RS05170 (ETA10_05170)	-	981743..982189 (-)	447	WP_015252490.1	hypothetical protein	-
ETA10_RS05175 (ETA10_05175)	yhcN	982339..982908 (+)	570	WP_015252489.1	YhcN/YlaJ family sporulation lipoprotein	-
ETA10_RS05180 (ETA10_05180)	-	983029..983998 (+)	970	Protein_943	hypothetical protein	-
ETA10_RS05185 (ETA10_05185)	yhcQ	983930..984583 (-)	654	WP_009966881.1	spore coat protein	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 46117.53 Da
• Isoelectric Point: 5.6997

>NTDB_id=299144 ETA10_RS05165 WP_087614474.1 980307..981479(+) (rapF) [Bacillus subtilis strain SRCM103773]
MRGVLDKDKIPYDVVTKRLNEWYTHIKNDALEKAKQIKKEVEEDLKKMEESKDALLYYQLLEFRHELLVNYMNSEKTEEL
KSSYLAMKKLEDQGNVTGMLEYYFHFFMGMYEFRRKKLTAAITSYRKAEAKLSEVDDEIEKAEFFFKVSYVYYYMKQTYF
SLNYAYRALEIYQRYDDYFIQRLRCQFVLGGNFIDSLEYEKALDTFMEALKIAEEIKIDYLIGMAHINIGICFDELKDYK
SASSHLKKALDLLEVSDHSFVAKTLFILTHVKIKQGDKESAGDYFQKGHEFVNKTNDAEYNAKFKILEGLYFSNGEYELI
SEAFAYFDSMKMYADLENYAVEVAQFFHRKQDFQRSSEYYMMSVEARNKIKKGEIINETQSGHIGSSGVN

Nucleotide

• Length: 1173 bp

>NTDB_id=299144 ETA10_RS05165 WP_087614474.1 980307..981479(+) (rapF) [Bacillus subtilis strain SRCM103773]
TTGCGAGGTGTTTTAGATAAAGATAAAATTCCATATGATGTAGTTACCAAAAGATTAAACGAATGGTACACTCATATAAA
AAATGATGCTCTTGAGAAAGCTAAACAAATAAAAAAAGAAGTTGAAGAAGATCTAAAAAAAATGGAAGAAAGTAAAGATG
CTTTACTATATTATCAATTACTTGAATTCCGCCACGAGTTATTGGTCAATTACATGAATTCAGAAAAGACAGAAGAATTG
AAAAGTTCATATCTGGCTATGAAAAAGTTGGAGGACCAGGGCAATGTTACTGGAATGTTGGAATATTATTTTCATTTCTT
TATGGGGATGTATGAATTCAGAAGAAAAAAACTAACTGCGGCAATAACTTCATATAGAAAAGCAGAAGCTAAATTAAGTG
AAGTAGATGATGAGATTGAAAAAGCAGAATTCTTTTTTAAAGTATCATATGTTTATTACTATATGAAGCAAACATACTTT
TCGCTTAACTATGCCTATAGAGCTCTTGAAATATATCAAAGGTATGATGATTACTTTATACAGAGATTAAGATGTCAATT
TGTATTAGGTGGAAACTTTATTGACTCCCTAGAATATGAAAAGGCATTGGATACATTTATGGAAGCGTTAAAAATAGCTG
AAGAAATTAAAATTGATTATTTAATTGGGATGGCACACATCAACATAGGTATTTGCTTTGATGAGTTAAAAGACTACAAA
AGTGCATCAAGTCATCTAAAAAAGGCGTTAGATTTGTTAGAGGTTAGCGATCACAGTTTTGTTGCGAAAACTCTTTTTAT
TTTAACACATGTAAAGATCAAGCAAGGTGACAAAGAATCAGCTGGTGACTATTTTCAAAAAGGACATGAGTTTGTAAATA
AAACAAATGATGCTGAATATAATGCTAAATTTAAAATATTAGAAGGACTTTATTTTTCAAATGGTGAATATGAATTGATT
AGTGAGGCTTTTGCATATTTTGATTCAATGAAAATGTATGCAGATTTAGAGAACTATGCTGTTGAAGTGGCCCAATTTTT
TCATCGGAAACAGGATTTTCAACGCTCAAGTGAATATTATATGATGAGTGTTGAAGCAAGAAACAAAATTAAAAAAGGAG
AGATTATTAATGAAACTCAGTCGGGTCATATTGGCAGTAGCGGTGTTAACTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (9-69)

• Tetratricopeptide repeat (TPR_12) (198-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	37.831	96.923	0.367