Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | DK875_RS00350 | Genome accession | NZ_CP030020 |
| Coordinates | 65595..65861 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain ISU2514 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 60595..70861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DK875_RS00320 (DK875_00325) | recA | 61784..62935 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| DK875_RS00325 (DK875_00330) | spx | 63171..63569 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| DK875_RS00330 (DK875_00335) | - | 63669..63935 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| DK875_RS00335 (DK875_00340) | ruvX | 63935..64354 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| DK875_RS00340 (DK875_00345) | - | 64366..64686 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| DK875_RS00345 (DK875_00350) | - | 64944..65522 (+) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| DK875_RS00350 (DK875_00355) | comX/sigX | 65595..65861 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| DK875_RS00355 (DK875_00360) | rpsJ | 66183..66491 (+) | 309 | WP_002939332.1 | 30S ribosomal protein S10 | - |
| DK875_RS00360 (DK875_00365) | rplC | 66704..67330 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| DK875_RS00365 (DK875_00370) | rplD | 67355..67978 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| DK875_RS00370 (DK875_00375) | - | 67978..68277 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| DK875_RS00375 (DK875_00380) | rplB | 68295..69128 (+) | 834 | WP_053866416.1 | 50S ribosomal protein L2 | - |
| DK875_RS00380 (DK875_00385) | rpsS | 69230..69511 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| DK875_RS00385 (DK875_00390) | rplV | 69529..69873 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| DK875_RS00390 (DK875_00395) | rpsC | 69886..70539 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=298348 DK875_RS00350 WP_002939335.1 65595..65861(+) (comX/sigX) [Streptococcus suis strain ISU2514]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=298348 DK875_RS00350 WP_002939335.1 65595..65861(+) (comX/sigX) [Streptococcus suis strain ISU2514]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |