Detailed information NTG0297833

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH17_RS09160
• Genome accession: NZ_CP035263
• Coordinates: 1836671..1837570 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904862.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901922
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1831671..1842570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH17_RS09135 (EQH17_09685)	rsmA	1832001..1832873 (-)	873	WP_001216879.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH17_RS09140 (EQH17_09690)	-	1833004..1833312 (-)	309	WP_000333257.1	hypothetical protein	-
EQH17_RS09145 (EQH17_09695)	-	1833305..1833946 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
EQH17_RS09150 (EQH17_09700)	-	1833948..1835978 (-)	2031	WP_000825246.1	bacteriocin-associated integral membrane family protein	-
EQH17_RS09155 (EQH17_09705)	-	1836055..1836351 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
EQH17_RS09160 (EQH17_09710)	comR	1836671..1837570 (-)	900	WP_000904862.1	helix-turn-helix transcriptional regulator	Regulator
EQH17_RS09165 (EQH17_09715)	rnmV	1837642..1838202 (-)	561	WP_000660013.1	ribonuclease M5	-
EQH17_RS09170 (EQH17_09720)	-	1838202..1838975 (-)	774	WP_000575596.1	TatD family hydrolase	-
EQH17_RS09175 (EQH17_09730)	-	1839280..1840257 (-)	978	Protein_1819	DUF1542 domain-containing protein	-
EQH17_RS09180 (EQH17_09735)	rpmH	1840463..1840597 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH17_RS09185 (EQH17_09740)	-	1840742..1841956 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
EQH17_RS09190 (EQH17_09745)	-	1842112..1842405 (-)	294	WP_000977363.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35409.16 Da
• Isoelectric Point: 4.7732

>NTDB_id=297833 EQH17_RS09160 WP_000904862.1 1836671..1837570(-) (comR) [Streptococcus pneumoniae strain TVO_1901922]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=297833 EQH17_RS09160 WP_000904862.1 1836671..1837570(-) (comR) [Streptococcus pneumoniae strain TVO_1901922]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.095	98.328	0.375
comR	Streptococcus suis P1/7	37.457	97.324	0.365
comR	Streptococcus suis 05ZYH33	37.457	97.324	0.365
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365