Detailed information NTG0296884

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH26_RS09785
• Genome accession: NZ_CP035254
• Coordinates: 1915106..1916005 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904859.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901932
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1910106..1921005

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH26_RS09760 (EQH26_10295)	rsmA	1910331..1911203 (-)	873	WP_001216882.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH26_RS09765	-	1911454..1911747 (-)	294	Protein_1922	hypothetical protein	-
EQH26_RS09770 (EQH26_10300)	-	1911740..1912381 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
EQH26_RS09775 (EQH26_10305)	-	1912383..1914413 (-)	2031	WP_000825259.1	bacteriocin-associated integral membrane family protein	-
EQH26_RS09780 (EQH26_10310)	-	1914490..1914786 (-)	297	WP_000815392.1	lactococcin 972 family bacteriocin	-
EQH26_RS09785 (EQH26_10315)	comR	1915106..1916005 (-)	900	WP_000904859.1	helix-turn-helix transcriptional regulator	Regulator
EQH26_RS09790 (EQH26_10320)	rnmV	1916077..1916637 (-)	561	WP_000660005.1	ribonuclease M5	-
EQH26_RS09795 (EQH26_10325)	-	1916637..1917410 (-)	774	WP_000575617.1	TatD family hydrolase	-
EQH26_RS09800 (EQH26_10335)	-	1917715..1918660 (-)	946	Protein_1929	DUF1542 domain-containing protein	-
EQH26_RS09805 (EQH26_10340)	rpmH	1918866..1919000 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH26_RS09810 (EQH26_10345)	-	1919145..1920359 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
EQH26_RS09815 (EQH26_10350)	-	1920515..1920808 (-)	294	WP_000977368.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35307.11 Da
• Isoelectric Point: 4.8952

>NTDB_id=296884 EQH26_RS09785 WP_000904859.1 1915106..1916005(-) (comR) [Streptococcus pneumoniae strain TVO_1901932]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=296884 EQH26_RS09785 WP_000904859.1 1915106..1916005(-) (comR) [Streptococcus pneumoniae strain TVO_1901932]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361