Detailed information NTG0296388

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH32_RS09285
• Genome accession: NZ_CP035248
• Coordinates: 1806328..1807227 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904837.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901939
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1801328..1812227

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH32_RS09265 (EQH32_09765)	rsmA	1801977..1802849 (-)	873	WP_001216845.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH32_RS09270 (EQH32_09770)	-	1803100..1803393 (-)	294	Protein_1832	hypothetical protein	-
EQH32_RS09275 (EQH32_09775)	-	1803386..1804027 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
EQH32_RS09280 (EQH32_09780)	-	1804029..1806059 (-)	2031	WP_000825272.1	bacteriocin-associated integral membrane family protein	-
EQH32_RS09285 (EQH32_09785)	comR	1806328..1807227 (-)	900	WP_000904837.1	helix-turn-helix transcriptional regulator	Regulator
EQH32_RS09290 (EQH32_09790)	rnmV	1807299..1807859 (-)	561	WP_000664448.1	ribonuclease M5	-
EQH32_RS09295 (EQH32_09795)	-	1807859..1808632 (-)	774	WP_000575600.1	TatD family hydrolase	-
EQH32_RS09300 (EQH32_09805)	-	1808937..1809908 (-)	972	Protein_1838	DUF1542 domain-containing protein	-
EQH32_RS09310 (EQH32_09810)	rpmH	1810114..1810248 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH32_RS09315 (EQH32_09815)	-	1810393..1811607 (-)	1215	WP_001860734.1	pyridoxal phosphate-dependent aminotransferase	-
EQH32_RS09320 (EQH32_09820)	-	1811763..1812056 (-)	294	WP_000977368.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35283.09 Da
• Isoelectric Point: 4.9873

>NTDB_id=296388 EQH32_RS09285 WP_000904837.1 1806328..1807227(-) (comR) [Streptococcus pneumoniae strain TVO_1901939]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMSQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=296388 EQH32_RS09285 WP_000904837.1 1806328..1807227(-) (comR) [Streptococcus pneumoniae strain TVO_1901939]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGTCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368
comR	Streptococcus pyogenes MGAS8232	36.242	99.666	0.361