Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SUB_RS00750 | Genome accession | NC_012004 |
| Coordinates | 125466..125765 (+) | Length | 99 a.a. |
| NCBI ID | WP_012657677.1 | Uniprot ID | B9DT02 |
| Organism | Streptococcus uberis 0140J | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 120466..130765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SUB_RS00725 (SUB0117) | - | 122433..122798 (+) | 366 | WP_041817508.1 | DUF1033 family protein | - |
| SUB_RS00730 (SUB0118) | comGA/cglA | 122871..123812 (+) | 942 | WP_012657673.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SUB_RS00735 (SUB0119) | comGB | 123724..124779 (+) | 1056 | WP_172631729.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SUB_RS00740 (SUB0120) | comGC/cglC | 124780..125103 (+) | 324 | WP_012657675.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SUB_RS00745 (SUB0121) | comGD | 125057..125494 (+) | 438 | WP_012657676.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SUB_RS00750 (SUB0122) | comGE | 125466..125765 (+) | 300 | WP_012657677.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SUB_RS00755 (SUB0123) | comGF | 125725..126180 (+) | 456 | WP_012657678.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SUB_RS00760 (SUB0124) | comGG | 126158..126517 (+) | 360 | WP_012657679.1 | competence type IV pilus minor pilin ComGG | - |
| SUB_RS00765 (SUB0125) | comGH | 126562..127518 (+) | 957 | WP_012657680.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SUB_RS00770 (SUB0126) | - | 127574..128764 (+) | 1191 | WP_012657681.1 | acetate kinase | - |
| SUB_RS00775 (SUB0127) | - | 128882..129085 (+) | 204 | WP_012657682.1 | helix-turn-helix transcriptional regulator | - |
| SUB_RS00780 (SUB0128) | - | 129087..129539 (+) | 453 | WP_012657683.1 | hypothetical protein | - |
| SUB_RS00785 (SUB0129) | - | 129548..130201 (+) | 654 | WP_012657684.1 | CPBP family intramembrane glutamic endopeptidase | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11060.04 Da Isoelectric Point: 5.6792
>NTDB_id=29637 SUB_RS00750 WP_012657677.1 125466..125765(+) (comGE) [Streptococcus uberis 0140J]
MEIIKNEDIKAYILLESLIALAIMVFIVSLLLSALKQSQKDIALMRHKEEVVATGLMAIQTKQRQLELNGCHVTINSDQG
GLSILENDQEILKISRLSN
MEIIKNEDIKAYILLESLIALAIMVFIVSLLLSALKQSQKDIALMRHKEEVVATGLMAIQTKQRQLELNGCHVTINSDQG
GLSILENDQEILKISRLSN
Nucleotide
Download Length: 300 bp
>NTDB_id=29637 SUB_RS00750 WP_012657677.1 125466..125765(+) (comGE) [Streptococcus uberis 0140J]
GTGGAAATTATCAAAAACGAAGACATTAAAGCTTATATCCTATTAGAAAGCCTTATAGCTCTTGCCATTATGGTTTTTAT
CGTCTCATTACTTTTATCGGCATTAAAACAGTCTCAAAAGGATATTGCCCTTATGAGGCATAAGGAGGAAGTTGTGGCAA
CAGGGCTTATGGCTATCCAAACTAAGCAGAGACAACTGGAACTAAATGGTTGTCATGTTACCATAAATAGTGATCAAGGA
GGACTCTCAATCTTAGAAAATGATCAAGAAATACTCAAAATTAGTCGCTTGTCCAACTAA
GTGGAAATTATCAAAAACGAAGACATTAAAGCTTATATCCTATTAGAAAGCCTTATAGCTCTTGCCATTATGGTTTTTAT
CGTCTCATTACTTTTATCGGCATTAAAACAGTCTCAAAAGGATATTGCCCTTATGAGGCATAAGGAGGAAGTTGTGGCAA
CAGGGCTTATGGCTATCCAAACTAAGCAGAGACAACTGGAACTAAATGGTTGTCATGTTACCATAAATAGTGATCAAGGA
GGACTCTCAATCTTAGAAAATGATCAAGAAATACTCAAAATTAGTCGCTTGTCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
39.362 |
94.949 |
0.374 |