Detailed information NTG0296151

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH34_RS08960
• Genome accession: NZ_CP035246
• Coordinates: 1778204..1779115 (-)
• Length: 303 a.a.
• NCBI ID: WP_000904856.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901941
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1773204..1784115

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH34_RS08935 (EQH34_09480)	rsmA	1773534..1774406 (-)	873	WP_001216865.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH34_RS08940 (EQH34_09485)	-	1774537..1774845 (-)	309	WP_000333257.1	hypothetical protein	-
EQH34_RS08945 (EQH34_09490)	-	1774838..1775479 (-)	642	WP_000565533.1	ABC transporter ATP-binding protein	-
EQH34_RS08950 (EQH34_09495)	-	1775481..1777511 (-)	2031	WP_000825279.1	bacteriocin-associated integral membrane family protein	-
EQH34_RS08955 (EQH34_09500)	-	1777588..1777884 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
EQH34_RS08960 (EQH34_09505)	comR	1778204..1779115 (-)	912	WP_000904856.1	XRE family transcriptional regulator	Regulator
EQH34_RS08965 (EQH34_09510)	rnmV	1779187..1779747 (-)	561	WP_000660011.1	ribonuclease M5	-
EQH34_RS08970 (EQH34_09515)	-	1779747..1780520 (-)	774	WP_000575634.1	TatD family hydrolase	-
EQH34_RS08975 (EQH34_09525)	-	1780825..1781802 (-)	978	Protein_1774	DUF1542 domain-containing protein	-
EQH34_RS08980 (EQH34_09530)	rpmH	1782008..1782142 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH34_RS08985 (EQH34_09535)	-	1782287..1783501 (-)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
EQH34_RS08990 (EQH34_09540)	-	1783657..1783950 (-)	294	WP_000977365.1	hypothetical protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35479.78 Da
• Isoelectric Point: 4.5324

>NTDB_id=296151 EQH34_RS08960 WP_000904856.1 1778204..1779115(-) (comR) [Streptococcus pneumoniae strain TVO_1901941]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIEDLFYEQLPNEEKVWFEATRATIDVIRSGRPEYGETVLDDYFKTIYDKELFLINELEV
INLYFAIVLTKIKQGQNQIEEINRIHSFLVRLTNHVELIAPEYLFALSNTLFSGLACLDNLSSYDSLGAYIFSLNHIMEK
TQDFQKKPIILMLEWKLSLIINNDYVSAEQFYQKSKLFADIIENSYLVTMLEKQWQEDLKKYL

Nucleotide

• Length: 912 bp

>NTDB_id=296151 EQH34_RS08960 WP_000904856.1 1778204..1779115(-) (comR) [Streptococcus pneumoniae strain TVO_1901941]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATAGAGGATTTATTTTA
TGAGCAACTTCCTAATGAGGAAAAAGTATGGTTTGAAGCTACTAGAGCAACGATAGATGTTATTCGAAGTGGACGACCAG
AATACGGGGAAACCGTACTGGACGATTATTTTAAAACAATTTATGATAAGGAATTGTTTTTGATAAATGAATTAGAAGTT
ATCAACTTATATTTTGCTATAGTGCTTACAAAGATAAAACAAGGTCAAAATCAGATTGAAGAAATTAACAGAATTCATTC
GTTTTTAGTTCGTTTGACAAATCATGTAGAATTAATTGCACCAGAATATCTGTTTGCTTTAAGTAACACTTTGTTTTCGG
GTCTAGCCTGTTTGGATAACTTGTCATCTTATGATTCACTAGGAGCTTATATCTTTAGCCTTAATCATATAATGGAAAAA
ACACAAGATTTCCAGAAGAAACCAATTATATTAATGTTGGAGTGGAAATTATCTCTAATAATAAACAATGATTATGTTTC
TGCCGAACAGTTCTATCAGAAATCGAAGCTATTTGCTGATATAATAGAAAATTCTTATTTAGTTACTATGTTAGAAAAAC
AATGGCAAGAAGATTTAAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	39.189	97.69	0.383
comR	Streptococcus pyogenes MGAS8232	37.5	100	0.376
comR	Streptococcus suis P1/7	37.627	97.36	0.366
comR	Streptococcus suis 05ZYH33	37.627	97.36	0.366