Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | CSC58_RS01300 | Genome accession | NZ_CP029681 |
| Coordinates | 234064..234459 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain AR_0473 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 229064..239459
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC58_RS01270 (CSC58_0238) | - | 230325..230729 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| CSC58_RS01275 | - | 231065..231157 (+) | 93 | WP_031824610.1 | hypothetical protein | - |
| CSC58_RS01280 (CSC58_0239) | - | 231289..231522 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| CSC58_RS01285 (CSC58_0240) | murA | 231633..232898 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| CSC58_RS01290 (CSC58_0241) | fabZ | 232932..233372 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| CSC58_RS01295 (CSC58_0242) | - | 233430..233870 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| CSC58_RS01300 (CSC58_0243) | ssb | 234064..234459 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| CSC58_RS01305 (CSC58_0244) | sceD | 234848..235543 (+) | 696 | WP_000752001.1 | lytic transglycosylase SceD | - |
| CSC58_RS01310 (CSC58_0246) | tenA | 235930..236619 (+) | 690 | WP_000396064.1 | thiaminase II | - |
| CSC58_RS01315 (CSC58_0247) | thiD | 236612..237442 (+) | 831 | WP_000594951.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CSC58_RS01320 (CSC58_0248) | thiM | 237426..238217 (+) | 792 | WP_110179779.1 | hydroxyethylthiazole kinase | - |
| CSC58_RS01325 (CSC58_0249) | thiE | 238219..238860 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=295166 CSC58_RS01300 WP_000932694.1 234064..234459(+) (ssb) [Staphylococcus aureus strain AR_0473]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=295166 CSC58_RS01300 WP_000932694.1 234064..234459(+) (ssb) [Staphylococcus aureus strain AR_0473]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |