Detailed information NTG0294965

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH45_RS09565
• Genome accession: NZ_CP035235
• Coordinates: 1878066..1878965 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904834.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902276
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1873066..1883965

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH45_RS09540 (EQH45_10060)	rsmA	1873303..1874175 (-)	873	WP_001216878.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH45_RS11320	-	1874561..1874707 (-)	147	WP_000333269.1	hypothetical protein	-
EQH45_RS09550 (EQH45_10065)	-	1874700..1875341 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
EQH45_RS09555 (EQH45_10070)	-	1875343..1877373 (-)	2031	WP_000825268.1	bacteriocin-associated integral membrane family protein	-
EQH45_RS09560 (EQH45_10075)	-	1877450..1877746 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
EQH45_RS09565 (EQH45_10080)	comR	1878066..1878965 (-)	900	WP_000904834.1	helix-turn-helix transcriptional regulator	Regulator
EQH45_RS09570 (EQH45_10085)	rnmV	1879037..1879597 (-)	561	WP_000664448.1	ribonuclease M5	-
EQH45_RS09575 (EQH45_10090)	-	1879597..1880370 (-)	774	WP_000575594.1	TatD family hydrolase	-
EQH45_RS09580 (EQH45_10100)	-	1880675..1881646 (-)	972	Protein_1901	DUF1542 domain-containing protein	-
EQH45_RS09585 (EQH45_10110)	rpmH	1881852..1881986 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH45_RS09590 (EQH45_10115)	-	1882131..1883345 (-)	1215	WP_000666482.1	pyridoxal phosphate-dependent aminotransferase	-
EQH45_RS09595 (EQH45_10120)	-	1883501..1883794 (-)	294	WP_000977374.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35263.10 Da
• Isoelectric Point: 4.9762

>NTDB_id=294965 EQH45_RS09565 WP_000904834.1 1878066..1878965(-) (comR) [Streptococcus pneumoniae strain TVO_1902276]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=294965 EQH45_RS09565 WP_000904834.1 1878066..1878965(-) (comR) [Streptococcus pneumoniae strain TVO_1902276]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361