Detailed information NTG0294846

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: EQH46_RS09355
• Genome accession: NZ_CP035234
• Coordinates: 1838478..1839377 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904834.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1902277
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1833478..1844377

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH46_RS09330 (EQH46_09835)	rsmA	1833715..1834587 (-)	873	WP_001216878.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
EQH46_RS11120	-	1834973..1835119 (-)	147	WP_000333269.1	hypothetical protein	-
EQH46_RS09340 (EQH46_09840)	-	1835112..1835753 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
EQH46_RS09345 (EQH46_09845)	-	1835755..1837785 (-)	2031	WP_000825268.1	bacteriocin-associated integral membrane family protein	-
EQH46_RS09350 (EQH46_09850)	-	1837862..1838158 (-)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
EQH46_RS09355 (EQH46_09855)	comR	1838478..1839377 (-)	900	WP_000904834.1	helix-turn-helix transcriptional regulator	Regulator
EQH46_RS09360 (EQH46_09860)	rnmV	1839449..1840009 (-)	561	WP_000664448.1	ribonuclease M5	-
EQH46_RS09365 (EQH46_09865)	-	1840009..1840782 (-)	774	WP_000575594.1	TatD family hydrolase	-
EQH46_RS09370 (EQH46_09875)	-	1841087..1842058 (-)	972	Protein_1863	DUF1542 domain-containing protein	-
EQH46_RS09375 (EQH46_09885)	rpmH	1842264..1842398 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
EQH46_RS09380 (EQH46_09890)	-	1842543..1843757 (-)	1215	WP_000666482.1	pyridoxal phosphate-dependent aminotransferase	-
EQH46_RS09385 (EQH46_09895)	-	1843913..1844206 (-)	294	WP_000977374.1	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35263.10 Da
• Isoelectric Point: 4.9762

>NTDB_id=294846 EQH46_RS09355 WP_000904834.1 1838478..1839377(-) (comR) [Streptococcus pneumoniae strain TVO_1902277]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=294846 EQH46_RS09355 WP_000904834.1 1838478..1839377(-) (comR) [Streptococcus pneumoniae strain TVO_1902277]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	38.144	97.324	0.371
comR	Streptococcus suis 05ZYH33	38.144	97.324	0.371
comR	Streptococcus suis D9	36.12	100	0.361