Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   EQZ01_RS15345 Genome accession   NZ_CP035231
Coordinates   2926634..2927638 (-) Length   334 a.a.
NCBI ID   WP_017695488.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 2921634..2932638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS15320 (EQZ01_15320) acuA 2922561..2923193 (+) 633 WP_014480567.1 acetoin utilization protein acetyltransferase AcuA -
  EQZ01_RS15325 (EQZ01_15325) acuB 2923220..2923864 (+) 645 WP_003229294.1 acetoin utilization AcuB family protein -
  EQZ01_RS15330 (EQZ01_15330) acuC 2923861..2925024 (+) 1164 WP_077671511.1 acetoin utilization protein AcuC -
  EQZ01_RS15335 (EQZ01_15335) motS 2925035..2925763 (-) 729 WP_003229290.1 flagellar motor protein MotS -
  EQZ01_RS15340 (EQZ01_15340) motP 2925753..2926571 (-) 819 WP_015714528.1 flagellar motor protein MotP -
  EQZ01_RS15345 (EQZ01_15345) ccpA 2926634..2927638 (-) 1005 WP_017695488.1 catabolite control protein A Regulator
  EQZ01_RS15350 (EQZ01_15350) aroX 2927914..2928990 (-) 1077 WP_003223454.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  EQZ01_RS15355 (EQZ01_15355) ytxJ 2929226..2929552 (-) 327 WP_003229280.1 bacillithiol system redox-active protein YtxJ -
  EQZ01_RS15360 (EQZ01_15360) ytxH 2929576..2930031 (-) 456 WP_004398549.1 YtxH domain-containing protein -
  EQZ01_RS15365 (EQZ01_15365) ytxG 2930062..2930484 (-) 423 WP_003229276.1 DUF948 domain-containing protein -
  EQZ01_RS15370 (EQZ01_15370) murC 2930646..2931944 (-) 1299 WP_003229274.1 UDP-N-acetylmuramate--L-alanine ligase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36970.36 Da        Isoelectric Point: 5.0249

>NTDB_id=294725 EQZ01_RS15345 WP_017695488.1 2926634..2927638(-) (ccpA) [Bacillus subtilis strain SRCM103571]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEFKRSPVPIVLAASVEEQEETPSVAI
DYEQAIYDAVKLLVDKGHTDIAFVSGPMTEPINRSKKLQGYKRALEEANLPFNEQFVAEGDYTYDSGLEALQHLMSLDKK
PTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRKSTKS

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=294725 EQZ01_RS15345 WP_017695488.1 2926634..2927638(-) (ccpA) [Bacillus subtilis strain SRCM103571]
ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCATGGCAACCGTTTCCCGTGTCGTGAACGGCAA
CCCGAATGTAAAACCGACAACGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAACGCGGTGGCAA
GAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCATCATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCG
CGCGGAATTGAAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGACCAAAACATGGAGAAAGAGCT
GCACTTGTTAAACACAATGCTCGGCAAACAAGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG
CGGAATTTAAGCGTTCCCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAAGAGCAGGAGGAAACACCGTCAGTCGCTATC
GATTACGAACAGGCGATTTATGATGCTGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCGTTTCCGGACC
AATGACAGAACCGATCAACCGTTCGAAAAAACTCCAAGGCTACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATG
AACAATTTGTAGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATCTGATGAGCCTGGATAAAAAA
CCGACAGCCATTCTTTCTGCAACTGATGAAATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC
GGAGGATCTCGACATTATCGGCTTTGATAATACAAGATTAAGTCTCATGGTTCGTCCGCAGCTGTCAACAGTTGTTCAGC
CGACATACGATATTGGCGCCGTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGAGCATATCGTC
GAACTGCCGCACCGTATCGAGCTAAGAAAGTCAACCAAGTCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

54.545

98.802

0.539

  ccpA Streptococcus gordonii str. Challis substr. CH1

53.636

98.802

0.53

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

50.602

99.401

0.503


Multiple sequence alignment