Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   EQZ01_RS09000 Genome accession   NZ_CP035231
Coordinates   1689353..1691299 (+) Length   648 a.a.
NCBI ID   WP_015252109.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103571     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1684353..1696299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQZ01_RS08975 (EQZ01_08975) def 1684723..1685205 (+) 483 WP_015383630.1 peptide deformylase -
  EQZ01_RS08980 (EQZ01_08980) fmt 1685210..1686163 (+) 954 WP_021479312.1 methionyl-tRNA formyltransferase -
  EQZ01_RS08985 (EQZ01_08985) rsmB 1686150..1687493 (+) 1344 WP_024572632.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  EQZ01_RS08990 (EQZ01_08990) rlmN 1687497..1688588 (+) 1092 WP_069837503.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EQZ01_RS08995 (EQZ01_08995) prpC 1688595..1689359 (+) 765 WP_014479762.1 protein-serine/threonine phosphatase PrpC -
  EQZ01_RS09000 (EQZ01_09000) stkP 1689353..1691299 (+) 1947 WP_015252109.1 serine/threonine protein kinase PrkC Regulator
  EQZ01_RS09005 (EQZ01_09005) rsgA 1691314..1692210 (+) 897 WP_128737841.1 ribosome small subunit-dependent GTPase A -
  EQZ01_RS09010 (EQZ01_09010) rpe 1692215..1692868 (+) 654 WP_003232058.1 ribulose-phosphate 3-epimerase -
  EQZ01_RS09015 (EQZ01_09015) thiN 1692941..1693585 (+) 645 WP_014479765.1 thiamine diphosphokinase -
  EQZ01_RS09020 (EQZ01_09020) spoVM 1693657..1693737 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  EQZ01_RS09025 (EQZ01_09025) rpmB 1693810..1693998 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  EQZ01_RS09030 (EQZ01_09030) yloU 1694275..1694637 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 648 a.a.        Molecular weight: 71880.56 Da        Isoelectric Point: 4.7871

>NTDB_id=294675 EQZ01_RS09000 WP_015252109.1 1689353..1691299(+) (stkP) [Bacillus subtilis strain SRCM103571]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKRFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
PSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=294675 EQZ01_RS09000 WP_015252109.1 1689353..1691299(+) (stkP) [Bacillus subtilis strain SRCM103571]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTATAGGCGGCGGGGGAATGGCCAACGTTTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATTGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTAACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAAAAATCGGATATTTATGCGCTTGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCGTTTGATGGAGAGT
CAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCGTTTCATCGCTATGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAGATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTCGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAGAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTTGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCTCTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGACCCTAAAGCGGATACAACAGTCAAAGAAGGCGCCACGGTCACTCTTTATAAAAGCACCGGAAAGGC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCGTTGAAGGACCAAGGGTTTAAACATG
TAACGGTAAATGAAGTGAATGACGAGAAAAACGCAGGCACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CCGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACGCTTAGAGACTTGAAAACCTACAGTAA
AGAAGCAGCGTCTGGATATCTGGAAGACAACGGATTAAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACGTTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTACGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCGGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.517

89.506

0.363

  stkP Streptococcus pneumoniae D39

40.345

89.506

0.361

  stkP Streptococcus pneumoniae R6

40.345

89.506

0.361


Multiple sequence alignment