Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   EQY76_RS09195 Genome accession   NZ_CP035230
Coordinates   1750123..1752006 (+) Length   627 a.a.
NCBI ID   WP_128753681.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103551     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1745123..1757006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQY76_RS09180 (EQY76_09180) ymcA 1746160..1746591 (+) 432 WP_128753581.1 regulatory iron-sulfur-containing complex subunit RicA Regulator
  EQY76_RS09185 (EQY76_09185) cotE 1746853..1747398 (+) 546 WP_003231833.1 outer spore coat protein CotE -
  EQY76_RS09190 (EQY76_09190) hexA 1747531..1750107 (+) 2577 WP_046160418.1 DNA mismatch repair protein MutS Machinery gene
  EQY76_RS09195 (EQY76_09195) hexB 1750123..1752006 (+) 1884 WP_128753681.1 DNA mismatch repair endonuclease MutL Machinery gene
  EQY76_RS09200 (EQY76_09200) - 1752348..1752527 (+) 180 WP_128753682.1 XtrA/YqaO family protein -
  EQY76_RS21845 (EQY76_09205) - 1752570..1752791 (+) 222 Protein_1747 VWA domain-containing protein -
  EQY76_RS09210 (EQY76_09210) - 1753118..1753366 (+) 249 WP_128753582.1 hypothetical protein -
  EQY76_RS09215 (EQY76_09215) - 1753417..1753779 (-) 363 WP_128753583.1 Ig-like domain-containing protein -
  EQY76_RS09220 (EQY76_09220) - 1754052..1754861 (+) 810 WP_128753584.1 hypothetical protein -
  EQY76_RS21645 - 1754897..1755038 (+) 142 Protein_1751 hypothetical protein -
  EQY76_RS09225 (EQY76_09225) - 1755043..1755492 (+) 450 WP_088272501.1 ArpU family phage packaging/lysis transcriptional regulator -
  EQY76_RS09230 (EQY76_09230) - 1755492..1756034 (+) 543 WP_003220264.1 tyrosine-type recombinase/integrase -

Sequence

Protein


Download         Length: 627 a.a.        Molecular weight: 70456.44 Da        Isoelectric Point: 6.0932

>NTDB_id=294534 EQY76_RS09195 WP_128753681.1 1750123..1752006(+) (hexB) [Bacillus subtilis strain SRCM103551]
MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGEGMENEDCKRAFRRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLEITTSTGEGAGTKLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYM
KTVHTELGNITDVVNRIALAHPEVSIRLRHHGKNLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHASSLDFEVKGYIALPE
ITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDLIRDG
IKDVFKQQQLIPSAQLPKKSAPVIKNEQQFITFDEKPPERKVPEKSHASSYSPMKLSSVVKEPVDAEEELPPLQFDAPPI
VDQKQILEVSDVSAKEPDTFEQECHEGQQQPASERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVG
EVEPEVQDMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNIDI
KKLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFKRVM

Nucleotide


Download         Length: 1884 bp        

>NTDB_id=294534 EQY76_RS09195 WP_128753681.1 1750123..1752006(+) (hexB) [Bacillus subtilis strain SRCM103551]
GTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAATAGCGGCGGGCGAGGTTGTGGAACGGCCCGCCTCAGT
CGTCAAAGAATTGGTGGAAAATGCGATCGACGCTGACAGCACAGTCATTGAAATCGATATTGAGGAAGCAGGCCTTGCAT
CCATTCGGGTCTTGGATAACGGCGAAGGAATGGAGAATGAAGATTGCAAGCGAGCTTTCCGCCGCCACGCAACGAGTAAA
ATAAAAGATGAAAATGATTTATTCAGGGTGAGAACGCTCGGTTTCAGGGGAGAAGCCCTGCCGAGTATCGCGTCAGTCTC
TCATCTGGAGATTACAACAAGCACTGGTGAAGGAGCTGGGACGAAGCTCGTCCTCCAAGGAGGAAACATCATTTCCGAAT
CGCGTTCCTCAAGCAGGAAGGGAACTGAAATTGTCGTTTCCAACCTGTTTTTTAACACACCGGCCCGTTTGAAATATATG
AAAACCGTTCATACAGAGCTTGGAAACATTACAGACGTGGTTAACCGTATTGCTCTGGCGCATCCAGAGGTATCGATCCG
CCTGCGACATCATGGGAAAAACCTGCTTCAAACGAACGGAAACGGAGATGTGCGCCATGTACTGGCAGCGATTTACGGCA
CGGCTGTCGCCAAAAAAATGCTTCCGCTGCATGCGAGCTCCTTGGATTTTGAAGTAAAGGGATATATCGCCCTCCCAGAG
ATTACACGGGCGTCGAGAAACTATATGTCGTCTGTGGTCAATGGCCGTTACATTAAAAATTTCCCGCTCGTCAAAGCGGT
TCATGAAGGCTATCATACGCTTCTGCCGATCGGACGCCATCCGATTACTTTTATAGAAATTACGATGGACCCGATTTTAG
TCGATGTCAACGTACATCCATCGAAGCTTGAGGTCCGGCTCAGCAAGGAAACAGAGCTTCATGACTTAATTCGTGACGGA
ATTAAAGATGTATTTAAACAGCAGCAGCTGATTCCGAGTGCCCAGCTCCCGAAAAAATCGGCCCCTGTTATCAAAAATGA
GCAGCAGTTCATAACCTTTGATGAAAAGCCTCCGGAAAGAAAAGTACCGGAAAAATCGCATGCGTCATCTTATTCACCAA
TGAAGCTCAGCTCAGTCGTGAAAGAGCCGGTTGATGCGGAGGAAGAATTGCCTCCTCTCCAATTTGATGCTCCTCCTATC
GTTGATCAGAAACAAATCCTTGAGGTGTCCGATGTTTCAGCGAAAGAGCCAGATACATTTGAGCAGGAATGCCATGAGGG
ACAGCAGCAGCCAGCGTCTGAGCGGGTTCCGATTATGTACCCGATCGGCCAGATGCACGGGACTTATATATTGGCACAAA
ACGAAAACGGCCTGTATATTATCGACCAGCACGCCGCCCAAGAACGTATTAAATATGAGTACTTTCGTGAAAAGGTGGGG
GAGGTTGAGCCTGAGGTGCAGGATATGATTGTACCGCTGACGTTCCACTACTCCACAAATGAGGCTTTGATTATTGAACA
GCACAAACAAGAGCTCGAAAGCGTCGGTGTCTTTTTAGAGTCATTCGGCTCCAACAGTTACATCGTCCGCTGCCACCCGG
CCTGGTTTCCAAAGGGAGAAGAAGCAGAGCTTATAGAAGAAATCATTCAGCAGGTGCTCGACTCCAAAAATATAGATATT
AAAAAACTCCGCGAGGAAGCGGCGATTATGATGAGCTGCAAAGGCTCCATCAAAGCAAATCGCCACCTCAGAAACGATGA
AATCAAAGCGCTTCTCGACGACCTCCGAAGCACATCAGACCCATTTACATGCCCGCACGGCCGCCCGATCATCATTCACC
ACTCGACATATGAGATGGAAAAGATGTTCAAACGCGTGATGTAG

Domains

Predicted by InterProScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-124)

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-324)

MutL C terminal dimerisation domain (MutL_C)

(442-583)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

45.75

100

0.472