Detailed information NTG0294190

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DLK06_RS11015
• Genome accession: NZ_CP029610
• Coordinates: 2253010..2253765 (-)
• Length: 251 a.a.
• NCBI ID: WP_032057017.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain ST220
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2248010..2258765

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLK06_RS10985 (DLK06_11000)	-	2248318..2248758 (-)	441	WP_002121449.1	SRPBCC family protein	-
DLK06_RS10990 (DLK06_11005)	tadA	2248829..2249332 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
DLK06_RS10995 (DLK06_11010)	hibch	2249338..2250462 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
DLK06_RS11000 (DLK06_11015)	ung	2250459..2251172 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
DLK06_RS11005 (DLK06_11020)	-	2251226..2251822 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
DLK06_RS11010 (DLK06_11025)	gspK	2252050..2253009 (-)	960	WP_005076277.1	type II secretion system minor pseudopilin GspK	-
DLK06_RS11015 (DLK06_11030)	xcpW	2253010..2253765 (-)	756	WP_032057017.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DLK06_RS11020 (DLK06_11035)	xcpV	2253765..2254145 (-)	381	WP_032057019.1	type II secretion system minor pseudopilin GspI	Machinery gene
DLK06_RS11025 (DLK06_11040)	-	2254135..2254689 (-)	555	WP_005069534.1	type II secretion system protein	-
DLK06_RS11030 (DLK06_11045)	-	2254696..2255304 (-)	609	WP_005069536.1	TetR/AcrR family transcriptional regulator	-
DLK06_RS11035 (DLK06_11050)	ycfH	2255341..2256114 (-)	774	WP_017399499.1	TatD family hydrolase	-
DLK06_RS11040 (DLK06_11055)	pilZ	2256132..2256473 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
DLK06_RS11045 (DLK06_11060)	holB	2256484..2257464 (-)	981	WP_032057020.1	DNA polymerase III subunit delta'	-
DLK06_RS11050 (DLK06_11065)	kdsB	2257478..2258239 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28696.96 Da
• Isoelectric Point: 9.5669

>NTDB_id=294190 DLK06_RS11015 WP_032057017.1 2253010..2253765(-) (xcpW) [Acinetobacter pittii strain ST220]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=294190 DLK06_RS11015 WP_032057017.1 2253010..2253765(-) (xcpW) [Acinetobacter pittii strain ST220]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAATTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80	99.602	0.797