Detailed information NTG0293758

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: DLD53_RS14560
• Genome accession: NZ_CP029569
• Coordinates: 2988491..2990656 (+)
• Length: 721 a.a.
• NCBI ID: WP_001017033.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain DA33098
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2983491..2995656

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLD53_RS14540 (DLD53_14535)	pilM	2985454..2986512 (+)	1059	WP_004644147.1	pilus assembly protein PilM	Machinery gene
DLD53_RS14545 (DLD53_14540)	pilN	2986512..2987153 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
DLD53_RS14550 (DLD53_14545)	pilO	2987150..2987890 (+)	741	WP_000076099.1	type 4a pilus biogenesis protein PilO	Machinery gene
DLD53_RS14555 (DLD53_14550)	pilP	2987901..2988428 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
DLD53_RS14560 (DLD53_14555)	pilQ	2988491..2990656 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
DLD53_RS14565 (DLD53_14560)	aroK	2990668..2991237 (+)	570	WP_000643712.1	shikimate kinase AroK	-
DLD53_RS14570 (DLD53_14565)	aroB	2991266..2992348 (+)	1083	WP_001193991.1	3-dehydroquinate synthase	-
DLD53_RS14575 (DLD53_14570)	-	2992364..2993239 (+)	876	WP_000218808.1	hypothetical protein	-

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 77891.28 Da
• Isoelectric Point: 6.5404

>NTDB_id=293758 DLD53_RS14560 WP_001017033.1 2988491..2990656(+) (pilQ) [Acinetobacter baumannii strain DA33098]
MNHVFRQFSMGAVAIAIMQAASAQVSMTNIVPMQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFDKAQQGLKQSKI
SVATNEASSVDVTSDDQRSRLTVNLKDAGAFTTRVEGNTFILKINSAQTSNKPLPVVSAQPQGVSNIGFQRGSQGEGLVV
VDLLGSNTPVDVQQQGSKVVIRTIGTKIPTHLARRLNVNDFATPVSSIDAYNDKGVGVITIQSSGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSNNSNGLQHTSGGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADG
YGEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTSFKDALLSLNVTPSITPDGKIQMKLDISKDSVAGAAPN
GELILNKNNINTNVLVDNGETVILGGVFEQTTMNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLARN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=293758 DLD53_RS14560 WP_001017033.1 2988491..2990656(+) (pilQ) [Acinetobacter baumannii strain DA33098]
ATGAATCACGTATTCCGTCAGTTTTCTATGGGGGCTGTAGCTATTGCGATTATGCAGGCTGCATCTGCACAGGTCAGCAT
GACCAACATTGTACCAATGCAAATTGCAGGTCAGGGCACAGAAATTAGAGTCATGTTTAATGGCTTGCCACCACAACCAC
AAGCTTACCAACTTGAAAATCCTTCACGTTTAATCCTTGATTTTGATAAGGCACAGCAAGGTTTAAAACAGTCTAAAATT
AGTGTTGCAACTAATGAGGCTAGTTCTGTAGATGTTACTTCAGATGACCAGCGTTCACGTTTAACTGTAAACCTAAAAGA
TGCTGGAGCATTTACAACACGAGTAGAAGGTAATACCTTTATTTTAAAAATTAATTCTGCTCAAACAAGTAATAAGCCGC
TACCTGTGGTCTCAGCACAACCACAAGGTGTTTCAAATATTGGCTTTCAACGTGGTAGTCAGGGAGAAGGTCTGGTTGTT
GTAGATCTTTTAGGAAGTAATACGCCTGTAGATGTTCAGCAGCAGGGTAGTAAAGTCGTTATAAGAACAATAGGTACAAA
AATCCCGACACATTTAGCACGTCGCTTAAATGTAAATGATTTTGCAACACCGGTTTCAAGTATCGATGCTTATAATGATA
AAGGGGTTGGTGTAATAACTATCCAGTCCTCTGGTAGCTATGAATATATGGCCTATCAGGCAGAGAATAAGCTCACGATC
AGTTTGAAACGTCCCCAAGATAAAAATGTTACCTCTTTATATAAAACGCCGAATTATTCGGGAAATAAACTTTCATTAGA
CTTCCAAGATATTGAAGTACGTCGTGTGTTGCAATTGCTTGCTGATTTTACAGGCATCAATATGGTAGCTGCCGATAGTG
TACAAGGTAATATCACACTACGTTTAAAAGATGTACCTTGGGATCAGGCGCTTGATATTATTTTAAAAACTAAAAATCTT
GATAAACGCCGTAACGGCAATGTGATTTGGATTGCTCCAGTTGCAGAATTGATTAAAGCGGAAGAAGAAGAAGCGAAAGC
TGTTGCACAAAGTGTCAAACTTGCACCCTTACAGACTGAGTATATTCAACTGAAGTATGCTAAAGCTGGCGATATTATGG
GTCTCATTACACAAGGCTCAAATAATAGTAATGGCTTACAGCATACTTCTGGTGGAGGGACCTCAACTTCAACCAATTTA
AATACTGGAGTTGATAGTCTAGGCAATAATGTGGGGAGTTTGCTTAGCCCACGTGGCACTATTACCCAAGATGACCGAAC
TAATACTCTTATTATTAATGATACTGCTCAGTCAATTGATCAAATTCGTAAAATGATTGACCTACTTGATGTGCAAGTTA
AACAAGTTATGGTTGAAGCACGTATTGTGAGAGCCTCTACATCATTTACCAAAGAACTTGGTGTGAAGTGGGGCATTCTG
TCGCAAGGTATTACCAATAATAACAATTTGCTGGTTGGCGGTAGTGAAACAACTTTATGGAATTTACGCGAACCTAAAAA
AGATGAAACTACAGGTGGGTATAAATATACGATTGAGCGCCCAGATAACTTAAACGTGGATTTAGGGGTTTCTAATCCTG
CAGGAAGTATTGCTTTTGGCTTGATTAGTATGTCTGACTTTATGTTAGATCTTGAATTGTCTGCTTTACAAGCGGATGGT
TATGGTGAGGTTATTTCTACCCCTAAAGTCATGACTGCCGATAAACAAACAGCAAAAGTTGCAACTGGTCAACAAGTTCC
ATATCAATCTACAACTAACTCTGCGGCAGGTTCAACTGCTACAACATCTTTTAAAGATGCTTTGCTGAGTTTAAATGTGA
CACCAAGTATTACACCTGATGGCAAGATTCAAATGAAGTTGGATATTTCTAAGGATTCTGTAGCGGGTGCGGCTCCAAAT
GGAGAGTTGATTTTAAATAAAAATAATATCAACACCAATGTATTGGTAGATAATGGCGAAACTGTCATTTTGGGTGGTGT
TTTTGAGCAAACGACTATGAATTCACAAACCAAAGTTCCTTTCTTTGGTGATATTCCTGTTGTTGGGCGTTTATTTAGAA
AAGATGTAAAGTCTGATGATAAACAAGAGTTGCTGATTTTCGTTACACCACGAATTGTTAATGACACTTTAGCGAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

• AMIN domain (AMIN) (39-121)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	100	100	1
pilQ	Acinetobacter baumannii strain A118	99.861	100	0.999
comQ	Acinetobacter baylyi ADP1	75.38	100	0.756
pilQ	Pseudomonas aeruginosa PAK	40.42	99.168	0.401