Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   EQI56_RS08435 Genome accession   NZ_CP035165
Coordinates   1612083..1614029 (+) Length   648 a.a.
NCBI ID   WP_041850842.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103881     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1607083..1619029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI56_RS08410 (EQI56_08410) def 1607453..1607935 (+) 483 WP_015383630.1 peptide deformylase -
  EQI56_RS08415 (EQI56_08415) fmt 1607940..1608893 (+) 954 WP_021479312.1 methionyl-tRNA formyltransferase -
  EQI56_RS08420 (EQI56_08420) rsmB 1608880..1610223 (+) 1344 WP_021479311.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  EQI56_RS08425 (EQI56_08425) rlmN 1610227..1611318 (+) 1092 WP_021479310.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EQI56_RS08430 (EQI56_08430) prpC 1611325..1612089 (+) 765 WP_041850843.1 protein-serine/threonine phosphatase PrpC -
  EQI56_RS08435 (EQI56_08435) stkP 1612083..1614029 (+) 1947 WP_041850842.1 serine/threonine protein kinase PrkC Regulator
  EQI56_RS08440 (EQI56_08440) rsgA 1614044..1614940 (+) 897 WP_038828213.1 ribosome small subunit-dependent GTPase A -
  EQI56_RS08445 (EQI56_08445) rpe 1614945..1615598 (+) 654 WP_003232058.1 ribulose-phosphate 3-epimerase -
  EQI56_RS08450 (EQI56_08450) thiN 1615671..1616315 (+) 645 WP_041850841.1 thiamine diphosphokinase -
  EQI56_RS08455 (EQI56_08455) spoVM 1616387..1616467 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  EQI56_RS08460 (EQI56_08460) rpmB 1616540..1616728 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  EQI56_RS08465 (EQI56_08465) yloU 1617005..1617367 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 648 a.a.        Molecular weight: 71852.55 Da        Isoelectric Point: 4.7871

>NTDB_id=293153 EQI56_RS08435 WP_041850842.1 1612083..1614029(+) (stkP) [Bacillus subtilis strain SRCM103881]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDADRLNEKKFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
PSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=293153 EQI56_RS08435 WP_041850842.1 1612083..1614029(+) (stkP) [Bacillus subtilis strain SRCM103881]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTATAGGCGGCGGGGGAATGGCCAACGTCTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTCAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATACGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATAGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTAACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAAAAATCGGATATTTATGCGCTTGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCGTTTGATGGAGAGT
CAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCTTTTCATCGCTACGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCGACAGACTCAATGAAAAGAAATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTTGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAAAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTCGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCTCTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGATCCTAAAGCGGATACCACAGTCAAAGAAGGCGCCACGGTCACCCTTTATAAGAGCACCGGAAAAGC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCGTTGAAGGACCAAGGGTTTAAACATG
TAACAGTAAATGAAGTGAATGACGAGAAAAATGCGGGCACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CCGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACGCTTAGAGACTTGAAAACCTACAGTAA
AGAAGCAGCGTCTGGATATCTGGAAGACAACGGATTGAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACATTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTACGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCGGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.69

89.506

0.364

  stkP Streptococcus pneumoniae D39

40.517

89.506

0.363

  stkP Streptococcus pneumoniae R6

40.517

89.506

0.363

  stkP Streptococcus pneumoniae Rx1

40.345

89.506

0.361


Multiple sequence alignment