Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   EQI48_RS08575 Genome accession   NZ_CP035164
Coordinates   1632603..1634549 (+) Length   648 a.a.
NCBI ID   WP_128471781.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM104005     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 1627603..1639549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQI48_RS08550 (EQI48_08550) def 1627973..1628455 (+) 483 WP_029726494.1 peptide deformylase -
  EQI48_RS08555 (EQI48_08555) fmt 1628460..1629413 (+) 954 WP_017694851.1 methionyl-tRNA formyltransferase -
  EQI48_RS08560 (EQI48_08560) rsmB 1629400..1630743 (+) 1344 WP_015715870.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  EQI48_RS08565 (EQI48_08565) rlmN 1630747..1631838 (+) 1092 WP_021479310.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  EQI48_RS08570 (EQI48_08570) prpC 1631845..1632609 (+) 765 WP_014479762.1 protein-serine/threonine phosphatase PrpC -
  EQI48_RS08575 (EQI48_08575) stkP 1632603..1634549 (+) 1947 WP_128471781.1 serine/threonine protein kinase PrkC Regulator
  EQI48_RS08580 (EQI48_08580) rsgA 1634564..1635460 (+) 897 WP_128471782.1 ribosome small subunit-dependent GTPase A -
  EQI48_RS08585 (EQI48_08585) rpe 1635465..1636118 (+) 654 WP_003232058.1 ribulose-phosphate 3-epimerase -
  EQI48_RS08590 (EQI48_08590) thiN 1636191..1636835 (+) 645 WP_128471783.1 thiamine diphosphokinase -
  EQI48_RS08595 (EQI48_08595) spoVM 1636907..1636987 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  EQI48_RS08600 (EQI48_08600) rpmB 1637060..1637248 (-) 189 WP_003221548.1 50S ribosomal protein L28 -
  EQI48_RS08605 (EQI48_08605) yloU 1637525..1637887 (+) 363 WP_003232054.1 Asp23/Gls24 family envelope stress response protein -

Sequence


Protein


Download         Length: 648 a.a.        Molecular weight: 71879.58 Da        Isoelectric Point: 4.8153

>NTDB_id=293003 EQI48_RS08575 WP_128471781.1 1632603..1634549(+) (stkP) [Bacillus subtilis strain SRCM104005]
MLIGKRISGRYQILRVIGGGGMANVYLAEDIILDREVAIKILRFDYANDNEFIRRFRREAQSASSLDHPNIVSIYDLGEE
DDIYYIVMEYVEGMTLKEYITANGPLHPKEALNIMEQIVSAIAHAHQNQIVHRDIKPHNILIDHMGNIKVTDFGIATALS
STTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFDGESAVSIALKHLQAETPSAKRWNPSVPQS
VENIILKATAKDPFHRYETAEDMEADIKTAFDANRLNEKRFTIQEDEEMTKAIPIIKDEELAKAAGEKEAEVTTAQENKT
KKNGKRKKWPWVLLTICLVFITAGILAVTVFPSLFMPKDVKIPDVSGMEYEKAAGLLEKEGLQVDSEVLEISDEKIEEGL
MVKTDPKADTTVKEGATVTLYKSTGKAKTEIGDVTGQTVDQAKKALKDQGFKHVTVNEVNDEKNAGTVIDQNPSAGTELV
PSEDQVKLTVSIGPEDITLRDLKTYSKEAASGYLEDNGLKLVEKEAYSDDVPEGQVVKQKPAAGTAVKPGNEVEVTFSLG
PEKKPAKTVKEKVKIPYEPENEGDELQVQIAVDDADHSISDTYEEFKIKEPTERTIELKIEPGQKGYYQVMVNNKVVSYK
TIEYPKDE

Nucleotide


Download         Length: 1947 bp        

>NTDB_id=293003 EQI48_RS08575 WP_128471781.1 1632603..1634549(+) (stkP) [Bacillus subtilis strain SRCM104005]
GTGCTAATCGGCAAGCGGATCAGCGGGCGTTACCAAATTCTCCGCGTTATAGGCGGCGGGGGAATGGCCAACGTGTATTT
AGCTGAGGATATCATTCTAGACCGTGAAGTCGCAATTAAAATCCTGCGGTTTGACTATGCAAATGACAATGAATTTATCA
GACGTTTCCGCAGAGAAGCCCAATCCGCATCAAGCCTCGATCACCCGAATATTGTTAGCATTTACGATTTGGGCGAGGAA
GATGATATTTATTATATTGTCATGGAATATGTTGAAGGCATGACGCTTAAAGAATACATAACAGCAAATGGGCCGCTTCA
CCCTAAAGAAGCGCTGAACATCATGGAGCAAATTGTCTCAGCCATCGCTCATGCCCATCAAAACCAGATTGTTCACAGAG
ACATCAAGCCGCATAACATTTTGATTGATCATATGGGAAATATCAAAGTAACGGATTTTGGAATTGCGACGGCACTAAGT
TCGACCACAATCACCCATACCAATTCAGTTCTGGGCTCGGTCCATTACTTATCACCTGAACAGGCCCGGGGCGGCTTAGC
CACAAAAAAATCGGATATTTATGCGCTTGGAATCGTTCTATTTGAGCTTTTAACCGGCCGTATTCCGTTTGATGGAGAGT
CAGCAGTCAGCATCGCCTTGAAGCATCTTCAAGCGGAAACTCCTTCGGCAAAAAGGTGGAATCCATCGGTCCCCCAAAGC
GTTGAAAACATCATACTCAAGGCAACTGCCAAAGATCCGTTTCATCGCTATGAAACGGCTGAAGACATGGAAGCAGACAT
AAAAACAGCTTTTGATGCCAACAGACTCAATGAAAAGAGATTTACGATTCAAGAAGATGAAGAAATGACAAAAGCGATAC
CTATCATTAAAGATGAAGAACTCGCTAAAGCTGCTGGCGAAAAAGAAGCTGAAGTGACAACCGCACAAGAAAACAAAACA
AAGAAGAACGGCAAAAGAAAAAAGTGGCCGTGGGTTTTGCTCACGATATGCCTCGTTTTTATCACAGCTGGAATTCTTGC
TGTCACTGTTTTTCCGTCGCTTTTCATGCCTAAGGATGTCAAAATACCTGATGTCTCCGGAATGGAATACGAAAAAGCCG
CAGGGCTCTTGGAAAAAGAAGGTTTACAGGTTGATTCCGAGGTGTTGGAAATCTCAGATGAAAAAATTGAAGAGGGCCTG
ATGGTAAAAACGGATCCTAAAGCGGATACCACAGTCAAAGAAGGCGCCACGGTCACCCTTTATAAGAGCACCGGAAAAGC
AAAAACGGAGATCGGTGATGTGACAGGCCAAACGGTCGACCAGGCAAAAAAAGCATTGAAGGACCAAGGGTTTAAACATG
TAACGGTAAATGAAGTGAATGACGAGAAAAACGCGGGCACTGTCATTGACCAAAATCCTTCAGCAGGGACTGAGCTTGTC
CCGAGTGAAGATCAAGTCAAACTTACAGTCAGTATCGGACCCGAAGACATTACGCTTAGAGACTTGAAAACCTACAGTAA
AGAAGCAGCGTCTGGATATCTGGAAGACAACGGATTGAAGCTTGTAGAAAAAGAAGCATACTCAGATGATGTTCCAGAAG
GACAGGTTGTCAAACAAAAACCAGCAGCAGGTACGGCAGTAAAGCCGGGAAACGAAGTTGAAGTGACATTCTCTCTCGGA
CCAGAGAAAAAACCTGCGAAAACAGTGAAAGAAAAGGTCAAGATCCCCTACGAACCAGAAAATGAAGGGGACGAGCTTCA
AGTGCAAATCGCGGTTGACGATGCGGATCACAGCATCTCTGACACTTACGAAGAATTTAAGATAAAAGAGCCGACTGAAC
GAACGATCGAACTAAAGATTGAACCCGGCCAAAAAGGGTACTATCAAGTAATGGTAAACAATAAAGTTGTCAGCTACAAA
ACCATTGAGTATCCGAAAGATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

40.69

89.506

0.364

  stkP Streptococcus pneumoniae D39

40.517

89.506

0.363

  stkP Streptococcus pneumoniae R6

40.517

89.506

0.363

  stkP Streptococcus pneumoniae Rx1

40.345

89.506

0.361


Multiple sequence alignment