Detailed information NTG0292962

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: B7L90_RS17040
• Genome accession: NZ_CP029473
• Coordinates: 3375454..3376524 (+)
• Length: 356 a.a.
• NCBI ID: WP_003153083.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain Hx05
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3370454..3381524

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L90_RS17010 (B7L90_11145)	-	3370928..3371173 (-)	246	WP_003153078.1	DUF2626 domain-containing protein	-
B7L90_RS17015 (B7L90_11140)	-	3371410..3371790 (+)	381	WP_003153079.1	Spx/MgsR family RNA polymerase-binding regulatory protein	-
B7L90_RS17025 (B7L90_11130)	-	3371996..3372826 (+)	831	WP_025852928.1	STAS domain-containing protein	-
B7L90_RS17030 (B7L90_11125)	-	3372865..3374166 (-)	1302	WP_014305416.1	hemolysin family protein	-
B7L90_RS17035 (B7L90_11120)	-	3374312..3375262 (+)	951	WP_003153082.1	magnesium transporter CorA family protein	-
B7L90_RS17040 (B7L90_11115)	comGA	3375454..3376524 (+)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
B7L90_RS17045 (B7L90_11110)	comGB	3376511..3377548 (+)	1038	WP_024085602.1	competence type IV pilus assembly protein ComGB	Machinery gene
B7L90_RS17050 (B7L90_11105)	comGC	3377595..3377861 (+)	267	WP_042635730.1	competence type IV pilus major pilin ComGC	Machinery gene
B7L90_RS17055 (B7L90_11100)	comGD	3377851..3378288 (+)	438	WP_025852922.1	competence type IV pilus minor pilin ComGD	Machinery gene
B7L90_RS17060 (B7L90_11095)	comGE	3378272..3378586 (+)	315	WP_015388003.1	competence type IV pilus minor pilin ComGE	Machinery gene
B7L90_RS17065 (B7L90_11090)	comGF	3378495..3378995 (+)	501	WP_226565836.1	competence type IV pilus minor pilin ComGF	-
B7L90_RS17070 (B7L90_11085)	comGG	3378996..3379373 (+)	378	WP_014305410.1	competence type IV pilus minor pilin ComGG	Machinery gene
B7L90_RS17075 (B7L90_11080)	-	3379430..3379609 (+)	180	WP_003153093.1	YqzE family protein	-
B7L90_RS17080 (B7L90_11075)	-	3379649..3379978 (-)	330	WP_003153097.1	DUF3889 domain-containing protein	-
B7L90_RS17085 (B7L90_11070)	tapA	3380237..3380908 (+)	672	WP_025852919.1	amyloid fiber anchoring/assembly protein TapA	-
B7L90_RS17090 (B7L90_11065)	-	3380880..3381464 (+)	585	WP_025852917.1	signal peptidase I	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 40529.85 Da
• Isoelectric Point: 9.4729

>NTDB_id=292962 B7L90_RS17040 WP_003153083.1 3375454..3376524(+) (comGA) [Bacillus velezensis strain Hx05]
MKNIETYSRNIINEAYTARASDIHIVPREKDAFIHFRIGHALVKKRVLKKEECVRLISHFKFLSAMDIGERRKPQNGSLS
LPLPTETVHLRMSTLPTMNDESLVIRLLPKRQIPPLDKLSLFRGAGAALLSFLKHSHGLLLFTGPTGSGKTTTLYSLVNY
AKRHFNRRIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLSSLH
TRDAKGAIYRLLEFGVNMTEIEQTVIAIAAQRLVDLTCPFCKEENCSVYCRMYRQTRRAGIYELLYGKNLTQCFQEAKGE
HANFQYQTLRRLIRKGIALGYVTTDNYDRWVYHEAD

Nucleotide

• Length: 1071 bp

>NTDB_id=292962 B7L90_RS17040 WP_003153083.1 3375454..3376524(+) (comGA) [Bacillus velezensis strain Hx05]
GTGAAAAATATTGAAACATACAGCAGGAACATCATAAACGAGGCCTATACGGCAAGGGCTTCAGATATACACATTGTGCC
GAGAGAAAAGGATGCTTTCATTCATTTTCGCATCGGCCATGCTCTTGTGAAAAAAAGAGTCTTAAAAAAAGAGGAATGCG
TAAGGCTTATTTCTCATTTCAAGTTTTTATCGGCCATGGATATAGGAGAAAGACGTAAGCCGCAAAACGGGTCATTGTCT
CTGCCGCTTCCGACGGAAACCGTTCATTTGAGAATGTCAACCTTGCCGACAATGAATGATGAAAGTCTTGTCATCAGGCT
TTTGCCTAAGCGGCAGATTCCCCCTCTGGATAAACTGTCCTTATTTCGGGGGGCGGGCGCCGCACTATTGTCCTTTCTGA
AGCATTCACACGGCCTGCTTCTGTTTACCGGCCCGACCGGCTCTGGAAAAACGACCACTCTTTACTCGCTTGTCAACTAT
GCAAAACGGCATTTCAACCGGCGGATTGTCACGCTTGAAGACCCCGTAGAAACAAGAGATGAGGATGTGTTGCAAGTTCA
GGTGAATGAAAAAGCCGGAGTCACATATTCCGCCGGTTTAAAAGCGATTTTAAGACATGATCCCGATATGATCATCTTAG
GGGAAATCAGAGATGCCGAAACGGCTGAAATCGCAGTCCGCGCGGCCATGACGGGACACCTCGTTCTTTCAAGCCTGCAT
ACAAGAGATGCTAAGGGCGCCATATACAGGCTGCTGGAGTTTGGGGTGAACATGACAGAAATTGAACAAACCGTCATTGC
CATTGCCGCTCAGCGTCTGGTTGATTTAACATGTCCGTTCTGCAAAGAGGAAAACTGTTCCGTGTACTGCCGGATGTACA
GGCAGACCCGCCGTGCGGGCATTTATGAACTGCTCTACGGGAAAAACCTCACCCAATGCTTTCAGGAAGCAAAGGGAGAG
CACGCCAATTTTCAATATCAGACGCTCCGCAGGCTGATCAGAAAAGGAATCGCGCTCGGCTATGTCACAACCGACAATTA
CGATCGGTGGGTGTATCATGAAGCGGATTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (10-275)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Bacillus subtilis subsp. subtilis str. 168	82.022	100	0.82
pilB	Glaesserella parasuis strain SC1401	38.793	97.753	0.379
pilF	Thermus thermophilus HB27	37.892	98.596	0.374