Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DKG76_RS16740 Genome accession   NZ_CP029465
Coordinates   3337226..3339523 (-) Length   765 a.a.
NCBI ID   WP_032732271.1    Uniprot ID   -
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3332226..3344523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS16700 (DKG76_16700) - 3332693..3333124 (+) 432 WP_003241054.1 Na(+)/H(+) antiporter subunit B -
  DKG76_RS16705 (DKG76_16705) - 3333124..3333465 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  DKG76_RS16710 (DKG76_16710) - 3333458..3334939 (+) 1482 WP_032732272.1 Na+/H+ antiporter subunit D -
  DKG76_RS16715 (DKG76_16715) - 3334945..3335421 (+) 477 WP_003241050.1 Na+/H+ antiporter subunit E -
  DKG76_RS16720 (DKG76_16720) - 3335421..3335705 (+) 285 WP_003241049.1 Na(+)/H(+) antiporter subunit F1 -
  DKG76_RS16725 (DKG76_16725) mnhG 3335689..3336063 (+) 375 WP_003241048.1 monovalent cation/H(+) antiporter subunit G -
  DKG76_RS16730 (DKG76_16730) - 3336102..3336482 (-) 381 WP_019259331.1 hotdog fold thioesterase -
  DKG76_RS16735 (DKG76_16735) comA 3336501..3337145 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  DKG76_RS16740 (DKG76_16740) comP 3337226..3339523 (-) 2298 WP_032732271.1 histidine kinase Regulator
  DKG76_RS16745 (DKG76_16745) comX 3339531..3339692 (-) 162 WP_003241045.1 competence pheromone ComX -
  DKG76_RS16750 (DKG76_16750) - 3339707..3340567 (-) 861 WP_032732270.1 polyprenyl synthetase family protein -
  DKG76_RS16755 (DKG76_16755) degQ 3340751..3340891 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  DKG76_RS22010 - 3341071..3341238 (+) 168 WP_119914210.1 hypothetical protein -
  DKG76_RS16760 (DKG76_16760) - 3341351..3341719 (+) 369 WP_003241042.1 hypothetical protein -
  DKG76_RS16765 (DKG76_16765) pdeH 3341695..3342924 (-) 1230 WP_003241041.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88504.99 Da        Isoelectric Point: 7.9024

>NTDB_id=292758 DKG76_RS16740 WP_032732271.1 3337226..3339523(-) (comP) [Bacillus inaquosorum strain KCTC 13429]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKSINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFILKINESKDLLSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVVIYFCIILIKNKDTEQAHIIKVLTVINIFSFAPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPESDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQLIRDSTFLTQVFEELKNTILEVSLVSRAYVYEVSADGSIKLYDDETVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDNPCREDVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDNGVGFD
QEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=292758 DKG76_RS16740 WP_032732271.1 3337226..3339523(-) (comP) [Bacillus inaquosorum strain KCTC 13429]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGGGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGCGGAATAGAAAAAGGGGATATCGTAAAGAGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTAAGTTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACCTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATATTAA
AAATAAATGAATCGAAGGATTTACTATCTGCTTTAGTTTTAATTATATTTTTGTTATCTGCTTCTATTGCTTATATAAGC
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTAGTACCGA
TCATAAATGTAGTGTGTGAAATGTTTCGTTCACATCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCTTTT
TTCTTTTTATTTATCATAGTAGTGATTTATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAGGTCCTCACTGTTATTAATATCTTTTCTTTTGCACCTTTTTTGTGTTTATATTTGATACCTTATGTGTTTCTAAATG
CGCACTATGTTTCTTCCTTTTTAGCAGCTTCATTTATGATGTTAATACCTTTCTCCTTGGTATTTCAATTTATGACAAAT
AAAATCTATAATGTGGATTTTATTTTAAGCAGATTAAGATATTATGGCTTTTTAGCTTTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGAGAGTGATTTTTATAGTGTTAAACTAACATTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGGTTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAT
AGTATATATAAATTTACGCAGCTGATTAGAGACTCAACATTCCTGACTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTCTCTCTAGTTAGCCGAGCATATGTATATGAAGTTTCAGCAGACGGAAGTATTAAGCTATATGATGATGAGACCG
TAAATTCATTCGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGAAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAGATAGGTGAACGCGGTGGTAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCGTCT
CACACTTGAAGAACTTTCTTGGCTGAAAACCTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTGAAG
AGCTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCAAATCCAGTGTGGCTTAAGAAACTCATGTACACGATTGAA
GAAAAACAACGTTCTGATCTTGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCTTTAAAACGACAGTGTGA
GCTGTTTTTGGCTGATTTTAAGAAGGATGATAATCCATGCCGGGAAGATGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGGCTGGTG
AAGGCGCTGTCGAAGCTTGTGGCGCAGCAGCAGGAGCGGGTGCCGTTTCATATCCGTTTAAATACGGGCAGATTTACGGC
TTCGCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATTGTTCTTCATTATGAGGACAATGGCGTAGGGTTTGAT
CAAGAAAAAAATAATGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGACGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.067

100

0.596


Multiple sequence alignment