Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DKE43_RS10695 Genome accession   NZ_CP029464
Coordinates   2026663..2028969 (-) Length   768 a.a.
NCBI ID   WP_127687103.1    Uniprot ID   -
Organism   Bacillus pumilus strain ZB201701     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2021663..2033969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKE43_RS10655 (DKE43_10690) - 2022063..2022494 (+) 432 WP_106043633.1 Na(+)/H(+) antiporter subunit B -
  DKE43_RS10660 (DKE43_10695) - 2022494..2022835 (+) 342 WP_106156711.1 Na(+)/H(+) antiporter subunit C -
  DKE43_RS10665 (DKE43_10700) - 2022828..2024306 (+) 1479 WP_127687101.1 Na+/H+ antiporter subunit D -
  DKE43_RS10670 (DKE43_10705) - 2024313..2024792 (+) 480 WP_066030467.1 Na+/H+ antiporter subunit E -
  DKE43_RS10675 (DKE43_10710) - 2024792..2025073 (+) 282 WP_106030437.1 Na(+)/H(+) antiporter subunit F1 -
  DKE43_RS10680 (DKE43_10715) mnhG 2025057..2025431 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  DKE43_RS10685 (DKE43_10720) - 2025528..2025917 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  DKE43_RS10690 (DKE43_10725) comA 2025941..2026582 (-) 642 WP_060597210.1 response regulator transcription factor Regulator
  DKE43_RS10695 (DKE43_10730) comP 2026663..2028969 (-) 2307 WP_127687103.1 ATP-binding protein Regulator
  DKE43_RS10700 (DKE43_10735) comX 2028983..2029165 (-) 183 WP_317615021.1 competence pheromone ComX -
  DKE43_RS10705 (DKE43_10740) - 2029134..2030057 (-) 924 WP_106071456.1 polyprenyl synthetase family protein -
  DKE43_RS10710 (DKE43_10745) degQ 2030209..2030349 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  DKE43_RS10715 (DKE43_10750) - 2030855..2031208 (+) 354 WP_060597216.1 hypothetical protein -
  DKE43_RS10720 (DKE43_10755) - 2031242..2032468 (-) 1227 WP_106072124.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88592.06 Da        Isoelectric Point: 7.7557

>NTDB_id=292675 DKE43_RS10695 WP_127687103.1 2026663..2028969(-) (comP) [Bacillus pumilus strain ZB201701]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKVNSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNEKPVEEV
RRGFLANVKSLVVDRHGDKISLENVRLLSQENLFIYLIPVILYSISLFCIFMILKFNKANKKTSAYILALFLLAVSIGYV
SSGGSGKGEAISRVLVIATMNSVPPLYMHFMYQYLKELGTKIIRRRVLFSLYLVPVTNILLDLFYKNKEEPINLLAYVNL
LSFFILCFISIIITIIAAKKLKDNAVSNVLRAFALILISSFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGLLAITPTILVVIIFDFIQKPTANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGKIIE
LDKGFMMKIGERGGHSFMICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAMSKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDDGV
GFDASHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=292675 DKE43_RS10695 WP_127687103.1 2026663..2028969(-) (comP) [Bacillus pumilus strain ZB201701]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATTCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTGTTTAATATTTTTGTGGGAGCAGCTGTTAAAGTAAATAGTCACGGTCAACTTGAAGTAGTGGATGTCGATAATTTTA
CAGACAGCTATCTTGCTGGTGTTAGAAAAGGCGATATCATACTTGAAGTGAACGGTAATGAAAAACCAGTTGAAGAAGTT
AGAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACACGGTGATAAAATTTCTTTAGAAAATGTAAGGTT
ATTAAGTCAAGAGAATCTTTTTATTTATCTAATCCCAGTCATTCTTTACTCAATCAGTCTATTTTGTATATTTATGATTT
TAAAATTTAATAAAGCTAACAAAAAAACGTCCGCATATATTTTAGCTTTATTTCTTTTGGCAGTTTCTATAGGCTATGTA
AGCTCTGGTGGTTCTGGAAAAGGAGAGGCTATTAGTCGCGTTCTCGTAATCGCTACAATGAATAGTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAAAGATTATTCGTCGGCGAGTTCTTTTTAGTTTGTATCTAG
TTCCAGTTACTAACATCTTATTAGATTTATTCTATAAAAATAAAGAAGAGCCAATTAATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTATTCTGTGTTTCATTTCAATTATTATCACTATAATAGCGGCTAAGAAATTAAAAGACAATGCAGTCAG
CAATGTTCTTCGAGCATTTGCACTCATTTTAATCTCATCGTTCAGTCCATTTATGCTGTTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCCTATGTTGTTGCATCATTCGTTCTATTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGTTGTATAATGTTGATTTTTTCATGGGAAGGATTAAATACTATGGTCTTTTAGCGATAACACCAACGATACT
AGTCGTTATTATTTTTGATTTTATACAAAAGCCAACTGCAAATTTTTATACAGTGAAATTTACGATTATCACGTATATTC
TTATGCTAACTGTCTTCTATTTCAAAGAAATCATTGATTTCCGCTTCCGGTTGAAGCGTTTTTCAGAGAAGCATAATTAC
CAGGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTGCTGTATCATTTGAAATACAC
CATTTTAGAAGTGCTTGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGGCAGATTGAAGAGATTGATGAAT
CTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAGGATATTTTAGGGGAAGTCGGGAAAATCATTGAG
CTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTATGATTTGCTGTTTATCCAATTTACAGAC
ACCGAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCTTTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AGATCGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAAGTCATGTTT
GCGATGGAAGAAAAGCAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCTGAAAAG
ACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCATGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTAGGTTTA
GTCAAGGCGATGTCGAAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACGACTCGCTTTGA
TAAGGAGCTGGACATTGATATTGACTCCCAGCTCAATATTTACCGGATTGTTCAGGAGCTGTTATCCAATGCCTTGAAAC
ATTCTCAAGCCAGCCAAGTGCTTGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGAGTC
GGTTTTGATGCAAGCCATCTTGATCAGCACACCATGAGCATGGGCCTCTCGGGAATCAGAGAACGAGTCAAGGCGTTAAA
TGGGAAGCTTCACATTCACACAGCCCCAGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.743

100

0.504


Multiple sequence alignment