Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DJ533_RS14705 Genome accession   NZ_CP029397
Coordinates   2565726..2566103 (-) Length   125 a.a.
NCBI ID   WP_065994146.1    Uniprot ID   -
Organism   Acinetobacter defluvii strain WCHA30     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2560726..2571103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ533_RS14690 (DJ533_14725) - 2562673..2564745 (-) 2073 WP_065994143.1 methyl-accepting chemotaxis protein -
  DJ533_RS14695 (DJ533_14730) - 2564795..2565328 (-) 534 WP_065994144.1 chemotaxis protein CheW -
  DJ533_RS14700 (DJ533_14735) - 2565331..2565699 (-) 369 WP_065994145.1 response regulator -
  DJ533_RS14705 (DJ533_14740) pilG 2565726..2566103 (-) 378 WP_065994146.1 twitching motility response regulator PilG Regulator
  DJ533_RS14710 (DJ533_14745) - 2566477..2567031 (+) 555 WP_089024788.1 hypothetical protein -
  DJ533_RS14715 (DJ533_14750) - 2567241..2568956 (+) 1716 WP_065994147.1 proline--tRNA ligase -
  DJ533_RS14720 (DJ533_14755) - 2568999..2570084 (-) 1086 WP_065994148.1 hypothetical protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14042.20 Da        Isoelectric Point: 4.9264

>NTDB_id=292232 DJ533_RS14705 WP_065994146.1 2565726..2566103(-) (pilG) [Acinetobacter defluvii strain WCHA30]
MEEKFQSLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGKVVGSDEYLTKPFSKDELLNAIRKHV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=292232 DJ533_RS14705 WP_065994146.1 2565726..2566103(-) (pilG) [Acinetobacter defluvii strain WCHA30]
ATGGAAGAGAAATTCCAAAGTTTAAAAGTCATGGTTATTGATGATTCTAAGACGATTCGTCGTACGGCTGAAACGCTGTT
ACAACGTGAAGGATGTGAAGTTATTACAGCGGTAGATGGTTTTGAAGCACTTTCAAAAATCGCTGATGCCAATCCAGACA
TTGTCTTCGTAGATATTATGATGCCGAGACTAGACGGTTATCAGACTTGTGCACTCATTAAAAACTCTCAAAATTATCAA
AATATTCCTGTGATTATGCTATCTAGTAAAGATGGTTTGTTTGATCAGGCAAAAGGTAAAGTTGTGGGTTCTGACGAGTA
TTTGACTAAGCCGTTCAGTAAAGATGAATTATTAAATGCTATTCGGAAACATGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.2

100

0.952
  vicR Streptococcus mutans UA159

41.88

93.6

0.392
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376

Multiple sequence alignment