Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | DJ533_RS09015 | Genome accession | NZ_CP029397 |
| Coordinates | 1409285..1410460 (+) | Length | 391 a.a. |
| NCBI ID | WP_065992243.1 | Uniprot ID | A0A2S2FCR9 |
| Organism | Acinetobacter defluvii strain WCHA30 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1404285..1415460
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DJ533_RS09000 (DJ533_09010) | - | 1404816..1405490 (+) | 675 | WP_065992240.1 | class I SAM-dependent methyltransferase | - |
| DJ533_RS09005 (DJ533_09015) | plsB | 1405528..1407693 (-) | 2166 | WP_065992241.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| DJ533_RS09010 (DJ533_09020) | cysK | 1407993..1408991 (+) | 999 | WP_065992242.1 | cysteine synthase A | - |
| DJ533_RS09015 (DJ533_09025) | pilU | 1409285..1410460 (+) | 1176 | WP_065992243.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| DJ533_RS09020 (DJ533_09030) | - | 1410679..1411104 (+) | 426 | WP_148245832.1 | hypothetical protein | - |
| DJ533_RS09025 (DJ533_09035) | nfsB | 1411222..1411875 (-) | 654 | WP_065992249.1 | oxygen-insensitive NAD(P)H nitroreductase | - |
| DJ533_RS09030 (DJ533_09040) | hpaI | 1412086..1412883 (+) | 798 | WP_065992250.1 | 4-hydroxy-2-oxoheptanedioate aldolase | - |
| DJ533_RS09035 (DJ533_09045) | - | 1413287..1413826 (+) | 540 | WP_065992251.1 | hypothetical protein | - |
| DJ533_RS09040 (DJ533_09050) | - | 1413871..1414290 (-) | 420 | WP_065992252.1 | hypothetical protein | - |
| DJ533_RS09045 (DJ533_09055) | - | 1414608..1415021 (+) | 414 | WP_065992254.1 | YeeE/YedE family protein | - |
| DJ533_RS09050 (DJ533_09060) | - | 1415024..1415437 (+) | 414 | WP_065992256.1 | DUF6691 family protein | - |
Sequence
Protein
Download Length: 391 a.a. Molecular weight: 44296.62 Da Isoelectric Point: 6.3220
>NTDB_id=292224 DJ533_RS09015 WP_065992243.1 1409285..1410460(+) (pilU) [Acinetobacter defluvii strain WCHA30]
MYTTELLQEAQRYMFHMLTKVVEFGGSDLFISADFPPSIKHQGLMKSLGQNALTAEKTKLFAYSLMNEKQRQEFETELEC
NFAISVPDVSRFRVNVFQQQLQVGMVIRTITAEIPNFTKLKLPEALKNVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
HSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTENDVGRRAAVEILLNTPLISDVVLKGNFHEIKEIMTKS
RELGMQTFDQALFDLYNERAISYDEALRNADSTNELRLQIKLKSTRENQINATTNTGLSMLQEETSVSETE
MYTTELLQEAQRYMFHMLTKVVEFGGSDLFISADFPPSIKHQGLMKSLGQNALTAEKTKLFAYSLMNEKQRQEFETELEC
NFAISVPDVSRFRVNVFQQQLQVGMVIRTITAEIPNFTKLKLPEALKNVIMEKRGLVLVVGGTGSGKSTSLAAMIDYRNE
HSAGHIITVEDPVEYVHKHKKSMITHREVGVDCHSWHNALKNTLRQAPDVILIGEIRDTETMEHAIAFAETGHLCLGTLH
ANNANQALDRIINFFPEERRNQLLMDLSSNMKAIISQRLIRTENDVGRRAAVEILLNTPLISDVVLKGNFHEIKEIMTKS
RELGMQTFDQALFDLYNERAISYDEALRNADSTNELRLQIKLKSTRENQINATTNTGLSMLQEETSVSETE
Nucleotide
Download Length: 1176 bp
>NTDB_id=292224 DJ533_RS09015 WP_065992243.1 1409285..1410460(+) (pilU) [Acinetobacter defluvii strain WCHA30]
ATGTATACAACAGAACTATTACAAGAAGCACAACGCTATATGTTCCATATGTTGACTAAGGTAGTAGAGTTTGGGGGATC
AGACTTATTTATTTCTGCGGATTTTCCACCGAGTATAAAACATCAAGGTTTAATGAAATCTTTGGGACAAAACGCATTAA
CTGCGGAAAAAACTAAACTTTTTGCTTATAGTTTGATGAATGAGAAGCAACGTCAGGAATTCGAAACAGAATTGGAATGT
AACTTTGCAATATCTGTACCTGATGTTTCACGTTTTCGTGTGAATGTTTTTCAGCAACAGTTACAAGTCGGTATGGTGAT
TCGTACAATTACCGCAGAAATTCCAAACTTTACAAAACTCAAATTACCTGAAGCACTTAAGAACGTGATTATGGAAAAGC
GTGGTTTAGTGCTCGTTGTGGGGGGGACAGGCTCAGGAAAGTCAACATCATTGGCTGCTATGATTGATTATAGAAATGAG
CATTCAGCTGGACATATTATTACGGTAGAAGATCCTGTGGAATATGTACATAAACATAAAAAATCTATGATTACACACCG
TGAAGTCGGGGTAGATTGTCATTCTTGGCATAATGCTTTAAAAAATACCTTACGCCAAGCCCCAGACGTTATTTTGATCG
GTGAAATTCGTGATACAGAAACTATGGAGCATGCGATCGCTTTTGCTGAAACAGGACATCTCTGTCTAGGAACGTTACAT
GCCAATAACGCCAATCAAGCATTAGATCGAATCATTAATTTTTTTCCAGAGGAACGCCGCAATCAGTTGTTAATGGACTT
ATCATCGAATATGAAAGCGATCATTTCGCAACGTTTAATTCGAACAGAAAATGATGTAGGTCGTCGTGCAGCAGTTGAAA
TTTTACTCAATACCCCTTTAATTTCAGATGTGGTTTTAAAAGGAAACTTCCATGAAATTAAAGAAATCATGACAAAATCT
CGGGAGCTTGGGATGCAAACTTTCGATCAAGCATTGTTTGATTTATATAATGAAAGAGCTATTAGCTATGATGAAGCATT
GCGAAATGCAGACTCGACCAATGAGTTACGTTTACAGATTAAGTTAAAAAGTACAAGAGAAAATCAAATAAACGCTACGA
CAAACACTGGCTTAAGCATGTTACAAGAAGAAACATCTGTCAGTGAAACAGAATAA
ATGTATACAACAGAACTATTACAAGAAGCACAACGCTATATGTTCCATATGTTGACTAAGGTAGTAGAGTTTGGGGGATC
AGACTTATTTATTTCTGCGGATTTTCCACCGAGTATAAAACATCAAGGTTTAATGAAATCTTTGGGACAAAACGCATTAA
CTGCGGAAAAAACTAAACTTTTTGCTTATAGTTTGATGAATGAGAAGCAACGTCAGGAATTCGAAACAGAATTGGAATGT
AACTTTGCAATATCTGTACCTGATGTTTCACGTTTTCGTGTGAATGTTTTTCAGCAACAGTTACAAGTCGGTATGGTGAT
TCGTACAATTACCGCAGAAATTCCAAACTTTACAAAACTCAAATTACCTGAAGCACTTAAGAACGTGATTATGGAAAAGC
GTGGTTTAGTGCTCGTTGTGGGGGGGACAGGCTCAGGAAAGTCAACATCATTGGCTGCTATGATTGATTATAGAAATGAG
CATTCAGCTGGACATATTATTACGGTAGAAGATCCTGTGGAATATGTACATAAACATAAAAAATCTATGATTACACACCG
TGAAGTCGGGGTAGATTGTCATTCTTGGCATAATGCTTTAAAAAATACCTTACGCCAAGCCCCAGACGTTATTTTGATCG
GTGAAATTCGTGATACAGAAACTATGGAGCATGCGATCGCTTTTGCTGAAACAGGACATCTCTGTCTAGGAACGTTACAT
GCCAATAACGCCAATCAAGCATTAGATCGAATCATTAATTTTTTTCCAGAGGAACGCCGCAATCAGTTGTTAATGGACTT
ATCATCGAATATGAAAGCGATCATTTCGCAACGTTTAATTCGAACAGAAAATGATGTAGGTCGTCGTGCAGCAGTTGAAA
TTTTACTCAATACCCCTTTAATTTCAGATGTGGTTTTAAAAGGAAACTTCCATGAAATTAAAGAAATCATGACAAAATCT
CGGGAGCTTGGGATGCAAACTTTCGATCAAGCATTGTTTGATTTATATAATGAAAGAGCTATTAGCTATGATGAAGCATT
GCGAAATGCAGACTCGACCAATGAGTTACGTTTACAGATTAAGTTAAAAAGTACAAGAGAAAATCAAATAAACGCTACGA
CAAACACTGGCTTAAGCATGTTACAAGAAGAAACATCTGTCAGTGAAACAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
56.319 |
93.095 |
0.524 |
| pilU | Acinetobacter baylyi ADP1 |
55.908 |
88.747 |
0.496 |
| pilU | Vibrio cholerae strain A1552 |
50.269 |
95.141 |
0.478 |