Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | DJ533_RS04155 | Genome accession | NZ_CP029397 |
| Coordinates | 383346..384755 (-) | Length | 469 a.a. |
| NCBI ID | WP_065995135.1 | Uniprot ID | A0A2S2FA27 |
| Organism | Acinetobacter defluvii strain WCHA30 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 378346..389755
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DJ533_RS04140 (DJ533_04150) | lptG | 379373..380443 (+) | 1071 | WP_065995132.1 | LPS export ABC transporter permease LptG | - |
| DJ533_RS04145 (DJ533_04155) | gpmI | 380566..382113 (+) | 1548 | WP_065995133.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| DJ533_RS04150 (DJ533_04160) | - | 382151..383323 (+) | 1173 | WP_065995134.1 | S41 family peptidase | - |
| DJ533_RS04155 (DJ533_04165) | pilR | 383346..384755 (-) | 1410 | WP_065995135.1 | sigma-54 dependent transcriptional regulator | Regulator |
| DJ533_RS04160 (DJ533_04170) | pilS | 384773..386359 (-) | 1587 | WP_065995172.1 | PAS domain-containing sensor histidine kinase | Regulator |
| DJ533_RS04165 (DJ533_04175) | - | 386372..387007 (-) | 636 | WP_065995136.1 | response regulator | - |
| DJ533_RS04170 (DJ533_04180) | - | 387239..388303 (+) | 1065 | WP_065995137.1 | serine hydrolase | - |
| DJ533_RS04175 (DJ533_04185) | - | 388322..389149 (-) | 828 | WP_065995138.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 469 a.a. Molecular weight: 52980.88 Da Isoelectric Point: 6.6865
>NTDB_id=292214 DJ533_RS04155 WP_065995135.1 383346..384755(-) (pilR) [Acinetobacter defluvii strain WCHA30]
MATKQPLVLLVDDEHDLCVLMQMTLARMGIKTHIAHHLQQAKLFFSEHKYNACITDLNLPDGSGLDLVKHVTQNYPKVPI
AVLTAYGNMEIAIASLKAGAFDFVNKPINQQHLHQLLTKALHVPLVDYSEDNLQLEHQLLIGESKPMLKLKDTIKKVARS
QAPVFISGESGTGKDVVAHLIHKLSNRSDSPFVVINCGAISEELIERELFGYVSHSFAGATQDKLGLIQSANGGCLFLDE
IAELSLTTQSKLLRALQEKKIRPLGSEQEIDVDFRIISATNQNLEERVQQGKFRQDLFFRIHVMDLHLPPLRERGKDILL
LAEHFIKNICLEWDIPSKELAEESKRFLQNQSYAGNVRELRNMIERAITLCDGQIIGLEHLQYSQKRNFSAPLVEAPLNS
ESLSNTQESSNQIPSEGLEQFLEKVEKEVLLNALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDSEDD
MATKQPLVLLVDDEHDLCVLMQMTLARMGIKTHIAHHLQQAKLFFSEHKYNACITDLNLPDGSGLDLVKHVTQNYPKVPI
AVLTAYGNMEIAIASLKAGAFDFVNKPINQQHLHQLLTKALHVPLVDYSEDNLQLEHQLLIGESKPMLKLKDTIKKVARS
QAPVFISGESGTGKDVVAHLIHKLSNRSDSPFVVINCGAISEELIERELFGYVSHSFAGATQDKLGLIQSANGGCLFLDE
IAELSLTTQSKLLRALQEKKIRPLGSEQEIDVDFRIISATNQNLEERVQQGKFRQDLFFRIHVMDLHLPPLRERGKDILL
LAEHFIKNICLEWDIPSKELAEESKRFLQNQSYAGNVRELRNMIERAITLCDGQIIGLEHLQYSQKRNFSAPLVEAPLNS
ESLSNTQESSNQIPSEGLEQFLEKVEKEVLLNALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDSEDD
Nucleotide
Download Length: 1410 bp
>NTDB_id=292214 DJ533_RS04155 WP_065995135.1 383346..384755(-) (pilR) [Acinetobacter defluvii strain WCHA30]
ATGGCCACAAAACAACCATTGGTTCTACTGGTAGATGATGAACATGACTTGTGCGTACTGATGCAAATGACATTGGCACG
AATGGGAATCAAAACCCATATCGCACATCATCTACAACAAGCAAAACTGTTCTTTAGTGAACACAAATACAATGCATGTA
TTACTGATCTCAATCTTCCTGATGGAAGTGGCTTAGATTTGGTTAAACACGTCACGCAAAATTATCCTAAAGTCCCTATA
GCGGTACTTACCGCTTATGGCAACATGGAGATCGCAATTGCCTCACTTAAAGCAGGTGCTTTTGATTTCGTCAATAAACC
GATTAATCAACAGCATTTACATCAACTGCTGACCAAAGCTTTACATGTACCTTTGGTCGACTATAGTGAAGATAATTTGC
AACTTGAGCATCAACTTTTAATCGGTGAATCTAAACCTATGTTGAAGTTGAAAGACACCATTAAAAAAGTAGCTCGTTCT
CAAGCACCTGTTTTTATTTCTGGTGAATCAGGCACAGGTAAAGATGTCGTTGCTCATTTGATCCATAAACTCAGTAACCG
CAGTGACAGCCCTTTTGTGGTGATTAATTGTGGCGCAATCTCCGAAGAGCTTATCGAAAGAGAGTTATTTGGCTATGTCA
GCCACAGCTTTGCAGGTGCGACCCAAGATAAACTGGGACTGATCCAATCTGCCAATGGTGGTTGTTTATTCCTAGATGAA
ATTGCTGAGCTTTCCTTAACCACACAAAGTAAATTATTACGTGCTTTACAAGAAAAGAAAATTCGCCCATTAGGCTCTGA
ACAAGAAATTGATGTAGATTTTCGAATCATTAGCGCCACCAATCAAAACCTGGAAGAACGCGTCCAACAAGGCAAGTTCA
GACAAGATTTATTTTTCCGTATTCATGTGATGGACTTACATTTACCGCCTTTACGTGAACGTGGTAAAGATATCCTATTG
CTTGCAGAGCATTTTATAAAAAATATTTGTTTAGAATGGGATATTCCAAGCAAAGAGTTAGCCGAAGAAAGTAAACGTTT
TTTACAAAACCAAAGCTATGCTGGAAATGTGCGTGAACTACGCAATATGATTGAACGTGCCATTACCTTATGCGATGGTC
AGATTATTGGTCTAGAACATTTACAATATTCGCAAAAGCGTAATTTTAGTGCCCCTCTCGTAGAAGCCCCGTTAAACTCA
GAAAGCCTTTCTAATACACAAGAAAGCTCTAATCAAATTCCATCTGAAGGCTTAGAACAGTTCTTAGAAAAAGTTGAAAA
AGAAGTTTTATTAAATGCCTTAAACCAAACGCATTGGAATAGAACCTTAGCCGCAAAAAAACTCGGCATGACCTTCCGTT
CTTTGCGTTATCGTTTGAAAAAATTCGGCTTAGACAGCGAGGATGATTAA
ATGGCCACAAAACAACCATTGGTTCTACTGGTAGATGATGAACATGACTTGTGCGTACTGATGCAAATGACATTGGCACG
AATGGGAATCAAAACCCATATCGCACATCATCTACAACAAGCAAAACTGTTCTTTAGTGAACACAAATACAATGCATGTA
TTACTGATCTCAATCTTCCTGATGGAAGTGGCTTAGATTTGGTTAAACACGTCACGCAAAATTATCCTAAAGTCCCTATA
GCGGTACTTACCGCTTATGGCAACATGGAGATCGCAATTGCCTCACTTAAAGCAGGTGCTTTTGATTTCGTCAATAAACC
GATTAATCAACAGCATTTACATCAACTGCTGACCAAAGCTTTACATGTACCTTTGGTCGACTATAGTGAAGATAATTTGC
AACTTGAGCATCAACTTTTAATCGGTGAATCTAAACCTATGTTGAAGTTGAAAGACACCATTAAAAAAGTAGCTCGTTCT
CAAGCACCTGTTTTTATTTCTGGTGAATCAGGCACAGGTAAAGATGTCGTTGCTCATTTGATCCATAAACTCAGTAACCG
CAGTGACAGCCCTTTTGTGGTGATTAATTGTGGCGCAATCTCCGAAGAGCTTATCGAAAGAGAGTTATTTGGCTATGTCA
GCCACAGCTTTGCAGGTGCGACCCAAGATAAACTGGGACTGATCCAATCTGCCAATGGTGGTTGTTTATTCCTAGATGAA
ATTGCTGAGCTTTCCTTAACCACACAAAGTAAATTATTACGTGCTTTACAAGAAAAGAAAATTCGCCCATTAGGCTCTGA
ACAAGAAATTGATGTAGATTTTCGAATCATTAGCGCCACCAATCAAAACCTGGAAGAACGCGTCCAACAAGGCAAGTTCA
GACAAGATTTATTTTTCCGTATTCATGTGATGGACTTACATTTACCGCCTTTACGTGAACGTGGTAAAGATATCCTATTG
CTTGCAGAGCATTTTATAAAAAATATTTGTTTAGAATGGGATATTCCAAGCAAAGAGTTAGCCGAAGAAAGTAAACGTTT
TTTACAAAACCAAAGCTATGCTGGAAATGTGCGTGAACTACGCAATATGATTGAACGTGCCATTACCTTATGCGATGGTC
AGATTATTGGTCTAGAACATTTACAATATTCGCAAAAGCGTAATTTTAGTGCCCCTCTCGTAGAAGCCCCGTTAAACTCA
GAAAGCCTTTCTAATACACAAGAAAGCTCTAATCAAATTCCATCTGAAGGCTTAGAACAGTTCTTAGAAAAAGTTGAAAA
AGAAGTTTTATTAAATGCCTTAAACCAAACGCATTGGAATAGAACCTTAGCCGCAAAAAAACTCGGCATGACCTTCCGTT
CTTTGCGTTATCGTTTGAAAAAATTCGGCTTAGACAGCGAGGATGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
66.809 |
100 |
0.67 |
| pilR | Pseudomonas aeruginosa PAK |
46.623 |
97.868 |
0.456 |